YALI0F06666g

Overview

Description weakly similar to uniprot|B6QTN0 Talaromyces marneffei putative F-box only protein
Locus type CDS
Locus tag YALI0F06666g

Location

Species Yarrowia lipolytica Positions 981315..983193
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1879 (nuc.)
Previous locus YALI0F06644g Next locus YALI0F06688g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06666g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06666gYALI0F06666g_mRNA-001YALI0F06666g_CDS-001

Nucleotide sequence

 

>YALI0F06666g
ATGTTGCAAGCCATACCGTACGAGCTGGCGCTGACGATTCTGCACCACCTCGACCACCTT
TCAGACCTTCTGGCCGTCTACAACACATGCCAGCGACTCCGACAAGTTGCATGCGACGAA
ACATTATGGAAACCCCATCTAAACAAACGATACAAGGCTGAAAACCGCCCTGAAGCCACG
GGCGAGTACAGAGACGAAATGCTGCGCCGCCTGAATACGGAGTCTGTGATTCTCAACGTT
CTGGAACGAATCCCGGACTCGTCAGCGTCCGAGTGGATGAACCTGTTCAAGATGGCCTTC
AACCTCGGAAAAATGTGTGTTTACCCGCTGACGCAGGTGGCACAGACCCACGACAACATC
TGTGCTCGGTGGACTGCTATGCAGCTGCTGCACTCCATGAAACATTGCGCTGGCATCACC
CGTTTGACCAGTGTGAATAGCAAGCAGTTGATGAAAGGTAGCGATGTGACCCACGTCTTT
GCCATGTTCCACTGTTTCACCGACTCGTATCTGGGTCATAATTTGGCGGAAAACTGCGAC
CGTGTCGACTTTCCCGACCTCCAGGGTATCACAACTTCAGATCAGGAACCCACACGGGTT
TTGCTGGAACAGCTACTGGCAGCTAATGCCGATCTGTGTGGCGTTCCTCCTCGAAACACC
TTCACGGCGGACTTCCGAAGTCTCTCAAACCACTACATCCACGACATTTTGCATAAAGAC
CATGTCTATGGTATTCCATTAACTCGAGCTATCATCTTCTGCAAGTATTGTTCCGATTAT
GGACTTGAAGCGCACCCTTTGTTATTTCCAGCAGAAGTTTTGGTGCGAGTGAACGACAAG
GGCACGGGGTCTCGGTTCTTTGTGGTTGATGTGTACAGACGAAACCGAATCTTGACACAC
AGCGAAGTTCTGGCCCTAGTACCGGAAAATGAAGATGTAGGAGCCCCCACGCTGCGAGAC
ACCCTGGTACGAAGTATGATGAACCTGCAGGCGAGTTTGGAGGTGAACGTGAGAAGAGGA
GTGCCTTCTCCGACTGAGTGTTACTACCTGATGTACACTCTGATGGCAGCTTTTATGCCA
CAGCACATGGACAGCACCCGCAAGACACAGCTCCAAGTGTTTCTGCGTAAATATTACCCT
CTGGACGTGCTGGTCATGTTGAAGGACATTAACCGAGTGTTTGCAACCGACAGCACAGAG
GTGACGCTTCTGGAACAGTTGGATCCAGTTCTACGAACGGTCAAGTCTCGAGACTCACAC
AGTAAGCATGTCAATCTCTATGTCGGTCAGGTGGTGCATCATACTCGTCTGGATCTCTAT
GGCATTGTCGTTTCGTGGTTTGTGAATTCCGAAACAGCTTATGAAGAAACAGCTCAGATT
CCCAACCGAGAGATCGACGTGGGCATGGAGGAGTCAGAGGCATACTACCAGGTGGTGGTC
GATGGAGTTGGGGAAAAGAGGGTGTTTGCAGAGTCCAATCTGGTGGTTGTGGACGAGACT
TCAGGGTTGGACATCATGGACACATTCTCGCATCTCCATGGACTGTGTCTCATGTTCAGG
GGATGGAATAAGGAGGAGTATCGCTTTGAGATGACCGAGGTAATGAAGAGGTGTTATCCG
GGCGATGCAAAACACTTCTGAGGAGTGCGATGAAGAGTGCAATTGACGGCAACCCTTCCC
TATTACCACCACTATCAAGAGTCTCATTGACCAAGTAGTAGACCAACCAGAGCCGCTTAA
AATGGTTACGGGACTAACGTATATATGCCTACTGCCTATTTATTTTATTCAATGCGCGAT
GCTAATACAGCGGTGGTGGATGTCCATTTTACAGCCACATCTACAAGTACCCCCTCCTTC
AAATGCATAAATAATTACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06666g_CDS-001

Protein length: 547 aa.
Product: Conserved hypothetical protein

>YALI0F06666g_CDS-001 MLQAIPYELALTILHHLDHLSDLLAVYNTCQRLRQVACDETLWKPHLNKRYKAENRPEAT
GEYRDEMLRRLNTESVILNVLERIPDSSASEWMNLFKMAFNLGKMCVYPLTQVAQTHDNI
CARWTAMQLLHSMKHCAGITRLTSVNSKQLMKGSDVTHVFAMFHCFTDSYLGHNLAENCD
RVDFPDLQGITTSDQEPTRVLLEQLLAANADLCGVPPRNTFTADFRSLSNHYIHDILHKD
HVYGIPLTRAIIFCKYCSDYGLEAHPLLFPAEVLVRVNDKGTGSRFFVVDVYRRNRILTH
SEVLALVPENEDVGAPTLRDTLVRSMMNLQASLEVNVRRGVPSPTECYYLMYTLMAAFMP
QHMDSTRKTQLQVFLRKYYPLDVLVMLKDINRVFATDSTEVTLLEQLDPVLRTVKSRDSH
SKHVNLYVGQVVHHTRLDLYGIVVSWFVNSETAYEETAQIPNREIDVGMEESEAYYQVVV
DGVGEKRVFAESNLVVVDETSGLDIMDTFSHLHGLCLMFRGWNKEEYRFEMTEVMKRCYP
GDAKHF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG