YALI0F06688g

Overview

Description highly similar to uniprot|O14155 Schizosaccharomyces pombe SPAC4A8.02C. gene
Locus type CDS
Locus tag YALI0F06688g

Location

Species Yarrowia lipolytica Positions 983961..984521
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 561 (nuc.)
Previous locus YALI0F06666g Next locus YALI0F06710g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06688g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06688gYALI0F06688g_mRNA-001YALI0F06688g_CDS-001

Nucleotide sequence

 

>YALI0F06688g
ATGACCTGGACACAAAAGACAATCACTCTGCCCCCCAAGACCAAGGGATCGTACCTGGTG
ACCGACGAGATTGTCAGCCAGGTGCCGGAGATCAAGAACTACAAGGTCGGCATGGCCAAC
TTCTTCATGCAACACACCTCGGCTGCTCTGACTCTCAACGAGAACTGGGACACAGACGTG
CGAGCAGATATGACCGATGCTCTGGCCCGAATTGCTCCTGAGTCCGATGTCTACCGACAC
AGTTGCGAGGGCCCCGATGACATGCCTGCTCACATTCGATCTTCTCTGGTCGGCGTGTCC
ATCAATGTCCCCATCAAGGACGGATATCTGGCCACCGGAACCTGGCAGGGAATCTGGTAC
CTCGAGTTCCGAAAGATGCGGCATACCCGAAAGGTTGTTGTGACTCTTCAGGGTGAGGAG
CGTAGCTGAACCAACCGGACAGCTCTGAGCGACAAGGAAGCGATCGCGTGATGCGAGCGA
TATGCGCAATGTCACCTCCCCTTGCCAATTGCAACTTGTGAATCAGCTGCATATATAAGT
GATAGATTTGATTGATTGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06688g_CDS-001

Protein length: 143 aa.
Product: Conserved hypothetical protein

>YALI0F06688g_CDS-001 MTWTQKTITLPPKTKGSYLVTDEIVSQVPEIKNYKVGMANFFMQHTSAALTLNENWDTDV
RADMTDALARIAPESDVYRHSCEGPDDMPAHIRSSLVGVSINVPIKDGYLATGTWQGIWY
LEFRKMRHTRKVVVTLQGEERS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG