YALI0F06644g

Overview

Description highly similar to uniprot|Q06217 Saccharomyces cerevisiae YLR275w SMD2 U1 snRNP protein
Locus type CDS
Locus tag YALI0F06644g

Location

Species Yarrowia lipolytica Positions 980266..981339
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1074 (nuc.)
Previous locus YALI0F06622g Next locus YALI0F06666g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06644g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06644gYALI0F06644g_mRNA-001YALI0F06644g_CDS-001

Nucleotide sequence

 

>YALI0F06644g
ATGGACAACCCAGCGTGAGTATAACGAGAAAAGCGGGATTTGGGGAGGATGATCAAACGA
GACGGACCAAATGATGGCTGGAATACGTGATGGATGATGCGATTGTGAAGTGATTTGTGG
AACCCAAGAATGAACGGTGTGCGACAAGCAGACACTGTTATTGTTTGGACCCGAACGGAG
AGTTGTGACAGCGTTAAGTGAAGGGATTGACTTTTTGAGAAGCTGTGAATGCCTTAATCA
ACTTCTTTACTAGGTTAATAGTCTCATGTAACAGTCAGATGAAAGCATGACTGCCCAAGA
CGCACGCCCGCAATCACTCCTACCACTCCGAACGACATCCCTAACATGGCACTTCGCGAA
CGGCACTGTGAGCACGGTATCTTGGTTGTAACGTTCACTGCGGATTGTCTCACGATTCAT
GACACACGAGCATGAAACAATAAGCAAGATGAATGGTACAAACATCAGCAAACAGCAGGA
TGCTTGACTGGCGGTCACACAGACATATATGGGGGACAGTTATACCACCGTCTCCCTAGT
TTCGCCATTGTTCAACATGCCTAATCTTGGCTCTATTCATCATCCTTGATTGTGCCTGAC
GTCCGATACAGACAGACCAGACATATCCTCAGGCGCACAATGCATCTTCTACTGTTGTCT
ACCAGACCTGCGATCCTCACACCCGTCTTATACTAACCCAGTGAACTCCTAAACAAGGAC
AAGTCCACTCTCACCGACGTGGAGCTCCAAAAGCTCGAGGAGTACGAGTTCTCACATGGC
CCCCTGTCGCTGCTGCAGCGGGCAGTACAGAACCACACACAGGTGCTGATATCGTGCCGA
AACAACAAAAAGCTGCTGGCCCGAGTCAAGGCGTTTGACCGGCACTCCAACATGGTGCTG
GAGAACGTGAAGGAGATGTGGACGGAAAAAACGAAAACCGCCAGCGGCAAGCCCGGCAAG
ACCGTCACCAAGGATCGGTTCATCAGCAAAATGTTTCTGCGAGGCGACACCGTCATTCTC
GTCGTTTCTGCATGAAAGGGAGGTTGTATAGTAATTATTTATGCATTTGAAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06644g_CDS-001

Protein length: 116 aa.
Product: Core Sm protein Sm D2, putative

>YALI0F06644g_CDS-001 MDNPAELLNKDKSTLTDVELQKLEEYEFSHGPLSLLQRAVQNHTQVLISCRNNKKLLARV
KAFDRHSNMVLENVKEMWTEKTKTASGKPGKTVTKDRFISKMFLRGDTVILVVSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG