YALI0F06446g

Overview

Description weakly similar to uniprot|P38753 Saccharomyces cerevisiae YHL002w
Locus type CDS
Locus tag YALI0F06446g

Location

Species Yarrowia lipolytica Positions 956218..958335
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2118 (nuc.)
Previous locus YALI0F06424g Next locus YALI0F06468g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06446g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06446gYALI0F06446g_mRNA-001YALI0F06446g_CDS-001

Nucleotide sequence

 

>YALI0F06446g
ATGTTCAGATCGTCGGAGCCCGTGTCGCCACTGGATGACGTGGTCACCAAGGCCACGGAC
GAAAACCTGACGACGGAAAACTGGCAGTACATACTCGACGTTTGCGACGAGGTGAACAAC
GACCCCGAAAATGGCGCGAAAAACGTCATCACCAGCGTCACCAAGCGTCTCAACAAGAAG
TTCGCCAATACCCAACTGTATGCGCTCACGCTGGTCATCTCGTTATCGTCCAACTGTGGC
TCCAAGATGCAGCAGGCCATTGCGTCCAAGGCGTTTGTCAAGACCCTCATGAAGCTGGCC
AACGACTCGGCCGTCCACAAGAGCGTCAAGTCCAAGGTGCTTGAGGTCCTGGAGCAGCTG
ACGGACGAGTATAAAAAGGACCCTTCGTTGCGGCTAATTGAGGAGGCCTACGACGAACTG
AGCAGGAAGAAGCCCGATCTCAAGGCCCCCGCCAAGCCCGAAAAACACAAAATCACCGAG
CAGGAGCGCCAGCGAGAGGAGGAGGAGCTGCAGATGGTGCTGGCGCTTTCGCTGAGCGAA
ACAAACACCTCTGGCTCATTTCAGCAGCATCACCAGACCAACTCTCAGATCCAACCTCCT
GTTAACAACTCTCATTTTGCCACGGACCCTCATCAGCAACAACAGCAGCAACAACAGCAG
CACAACCAGCAGGATTACGGGCAGCAGTCCAACAACGCCAACACCAACAACAACGCTCCG
GCAGTCGAGGACCCCACACCTACGGTGGCCACGGTGTCCCGAGTCAAGGCCCTGTATGAC
TTGAACGCCACAGAGCCCGGAGAACTGTCTTTCCGAAAGGGCGACATAATCACAGTGCTG
GAGTCAGTGTTCCGAGACTGGTGGCGGGGATCTCTGCGGGGCCAGGTCGGTATCTTCCCA
CTCAACTACGTGATGCCTATAGCCGAACCCACTCCCGCGGAGATTGAAAAGGAGGCCCAG
GAAGAGCTGTCTGTGTTCTCTCAGAGCAGAAATATTGAAAAGCTGCTGGCACTGCTGTCT
TCGCAGGACGCTGCCCGGCTTAATCTCGCCGAAAATGAGGAGCTACAGTCCTTGTACCAC
TCCACCCTTGCCATCCGGCCCAAGCTGGTCAAGCTAATCGACAAGTATGCCCAGCGAAAG
GACGACCTGGTGGAGCTCAACGAGAAATTTGTCAAGGCCCGAAGAGTGTATGATGACCTT
ATGGAGGCCAGCATGCCACAGTATGGAGGAGCTGCTGCAGCAGGTGGATATGCAGGTGGT
GCACAGGGTGGAGCTCCTGCAGGATATCCTAGTGCTCAGGGCGCTCCCGCAGGTTATCCA
GGTACTTCAGGTACTCCAGGTACTCCTGGTTACCCGCCTCAGTATCCTCCCCAGCAACAG
CAACAACAACAGCAACAGCAGCAGCAACAGCCTCCTTATCCTGTTCAGCCTCTTCAGACA
CATCAACAGCAGCCACAGCAGCAGCAACAGCAAACTCCATACCCCGTGCATCAATACGAT
AACACACAGGCGCATGGAAGACAGGGATCTACTGACTCTGGAAGATCACAGCGCATGTAT
TCCCAGGGAGGCCAGGGAGGCCAGGGACCCACAGATCTGCATCCCGCGACCACCGGAGGA
AGTGGGTACGGATTCCCTCCTCAATATGGGGGTGGAGCACCTTCTGCTCCCTCTGCTCCC
CATGGAGGTGCTGGAGGCCCCGGAGGCCCCGGAGGCCCTTCTGCCCCTTCTGGAGCCCAT
TCTGGAGCCCCCTCTGCGCCTCCTAGCCATGCTCCGGCTGCTTCTGCTCCTCACGGCTAC
GGATCTCCTTCTACAGCTCATTCGGCCCCCTACGGAACCTCCCCCGCGGCCTCTGCGCCC
GCCAGACACTCGCCATACATCAATGGCACGCCCACCAGCAACCTGGGACAGCAATCGCCG
GTCACCAGCCAGTCGATCCCTATTCCCAACAACAACAACCTGGCTGCTCCACCGGTCCAG
GGTCTGTACTCTCATGGCACCTCACCGCCTCCCCCGGTGCCCAATGCAGGCCCCCCTCCC
AGTAATTTTTACGAGTAGTTAATGAGCATATGACAATACGAGTGTGCAGTACATACTTGT
AGACGTATCCGTGGGTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06446g_CDS-001

Protein length: 686 aa.
Product: Conserved hypothetical protein

>YALI0F06446g_CDS-001 MFRSSEPVSPLDDVVTKATDENLTTENWQYILDVCDEVNNDPENGAKNVITSVTKRLNKK
FANTQLYALTLVISLSSNCGSKMQQAIASKAFVKTLMKLANDSAVHKSVKSKVLEVLEQL
TDEYKKDPSLRLIEEAYDELSRKKPDLKAPAKPEKHKITEQERQREEEELQMVLALSLSE
TNTSGSFQQHHQTNSQIQPPVNNSHFATDPHQQQQQQQQQHNQQDYGQQSNNANTNNNAP
AVEDPTPTVATVSRVKALYDLNATEPGELSFRKGDIITVLESVFRDWWRGSLRGQVGIFP
LNYVMPIAEPTPAEIEKEAQEELSVFSQSRNIEKLLALLSSQDAARLNLAENEELQSLYH
STLAIRPKLVKLIDKYAQRKDDLVELNEKFVKARRVYDDLMEASMPQYGGAAAAGGYAGG
AQGGAPAGYPSAQGAPAGYPGTSGTPGTPGYPPQYPPQQQQQQQQQQQQQPPYPVQPLQT
HQQQPQQQQQQTPYPVHQYDNTQAHGRQGSTDSGRSQRMYSQGGQGGQGPTDLHPATTGG
SGYGFPPQYGGGAPSAPSAPHGGAGGPGGPGGPSAPSGAHSGAPSAPPSHAPAASAPHGY
GSPSTAHSAPYGTSPAASAPARHSPYINGTPTSNLGQQSPVTSQSIPIPNNNNLAAPPVQ
GLYSHGTSPPPPVPNAGPPPSNFYE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG