YALI0F06468g

Overview

Description similar to uniprot|P33330 Saccharomyces cerevisiae YOR184w SER1 phosphoserine transaminase
Locus type CDS
Locus tag YALI0F06468g

Location

Species Yarrowia lipolytica Positions 958500..959739
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1240 (nuc.)
Previous locus YALI0F06446g Next locus YALI0F06490g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06468g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06468gYALI0F06468g_mRNA-001YALI0F06468g_CDS-001

Nucleotide sequence

 

>YALI0F06468g
ATGACCCGACCTCACCCCAATTACTACGGAGCTGGACCCGCTCTCCTTCCCTCAGAGGTC
ATTGAGGACGCCGCTGCCGGCATGGTAAACTACCAGGGTCTCGGAATCGGTCTGGGCGAG
ATTTCGCACCGATCTGGCCAGGCCACTGAAATCATCAATGGCGCCAAGAACAACCTCAAG
CAGCTGCTCGACGTGCCTGACACCCATGAGGTGTTCTTTGCCCAGGGTGGAGGCTCTGGC
GGCTTTGCTGCCATCGTCTACAACCTTCTTGGAGCCTACGCCAAGGAGACTGGCAAGAAG
GGCAAGGTGGACTACTTCATCACCGGCGACTGGTCCAAGAAGGCGACCGACGAGGCCATC
AAACTTGGAGCCGACGTGAACGTGGTTTCCGACTCTCGAAAGTTCACCGACAACGGCAAG
TTTGGCGTCATTGCTCCCCAGGACACCTGGACCTTCTCCGATCCCAAGGACACTGCTTAC
GTCTACTACTGTGACAACGAGACTGTGGCCGGTGTGGAGTTTCCCGAGACCCCCAAGATT
CCTGAGGGCGTCGAGCTGGTGGCCGACATGTCCTCCAACATCCTGTCCAAGGTCCTGGAC
GTGTCCAAGTTCGGTCTCATCTTCGGAGGTGCCCAGAAGAACATTGGTATTGCCGGTGTG
TCGTTCTACATCATCAAGAAGAGCCTGTTGCCCAAGGCTGACGTGGCTACTCTGCGAAAG
CTCGACATTGCTGTCACCCCCTCCTTCATGGACTTTGAAATCATTGTTAAGAACAACTCT
GCCTACAACACTGTCTCCATCCCCGCCGTCTACGTCGTTGAGAAGGTCAGCGAGCAGCTC
ATCAAGAAGGGAGGCCTCAAGGTGCAGCAGAAGGAGGCTGAAGAGAAGGCTGCTTCTCTG
TATGCCGCTCTGGATGCCCACAAGAAGCTGTACAACCTGCCTGTTGCTGTGGCCGACCGG
TCCAAGATGAACATTGTCTTCACCATCCATGGCGAGGGTCTCGAGGACAAGTTCCTCAAG
GAGGCGGCTGCCAAGGGTCTGACTGGTCTCAAGGGCCACCGATCCGTCGGAGGTATCCGA
ATCTCCAACTACAACGCCGTCACTGTCCAGAGCGCCGAGCTGCTCAAGGACTTTATCAAC
GAGTTTGCCAAGCAGAACGAGTAGACGGATGCGTTGCCAACATATAGAAGGGTGCAAACT
CTGACACTTGATTTATTGATGATTTGATTGTATTGTAGCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06468g_CDS-001

Protein length: 388 aa.
Product: 3-phosphoserine aminotransferase, putative

>YALI0F06468g_CDS-001 MTRPHPNYYGAGPALLPSEVIEDAAAGMVNYQGLGIGLGEISHRSGQATEIINGAKNNLK
QLLDVPDTHEVFFAQGGGSGGFAAIVYNLLGAYAKETGKKGKVDYFITGDWSKKATDEAI
KLGADVNVVSDSRKFTDNGKFGVIAPQDTWTFSDPKDTAYVYYCDNETVAGVEFPETPKI
PEGVELVADMSSNILSKVLDVSKFGLIFGGAQKNIGIAGVSFYIIKKSLLPKADVATLRK
LDIAVTPSFMDFEIIVKNNSAYNTVSIPAVYVVEKVSEQLIKKGGLKVQQKEAEEKAASL
YAALDAHKKLYNLPVAVADRSKMNIVFTIHGEGLEDKFLKEAAAKGLTGLKGHRSVGGIR
ISNYNAVTVQSAELLKDFINEFAKQNE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG