YALI0F06424g - LAG1

Overview

Description uniprot|Q6C2N3 Yarrowia lipolytica YALI0F06424g LAG1 Ceramide synthase complement
Locus type CDS
Gene name LAG1
Locus tag YALI0F06424g

Location

Species Yarrowia lipolytica Positions 952799..954183
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1385 (nuc.)
Previous locus YALI0F06402g Next locus YALI0F06446g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06424g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06424gYALI0F06424g_mRNA-001YALI0F06424g_CDS-001

Nucleotide sequence

 

>YALI0F06424g
ATGTCACAGCCATCTTCTCCATCTCAACCCACACGCAGACGATCGTCCATGGGCACCATT
GCGCTAGGAGACAACTCGGGCCCGGCCCTGGCCACCATGCCCGAAAACGTGCAGCAAGCC
CGGGCCTCCAAGGCCCGTCAACGAGCCATTTCCAACACGTCGTTGGACGACCGAAAGGCC
CCTGCCGGAACCTCCTCTTCGGCCGTTGTCGACCAAGATGACAAGCCACTCGGTCCCCTG
GCCTACCTGTGGACCTCGTATCGAGAGTATTCGTACCAGAACACCTGGCTCAACCCTCTG
CTGACCATGCTGGTGGTGGTGGGAGCTTACTACGCCCAGGGCAACCCCGGACCGCAAAAC
CCGCTGCATCGATTCATCTTCCCCTCCTACAAGCTGGCGCCCCACACGGAGCTCAATCCC
ACCGACGACTACATGTACGGCAAGGGCAAACGGGACTTCACCTTTGTGGGTTTCTACATG
ATCTTCTTCACCTTTTTCCGAGAGTTTGTGATGCAAATGTTCCTCAAGCCGTTTGCAACC
TTCTGCGGCGTCACCAAGAAGGGCAAGGTCAACCGGTTCATGGAACAGACCTACTCCATC
ATTTACTACTCGCTGGCGGGCTCCTTTGGCCTCTACATCATGTACCAGACTCCCATCTGG
TTCTTCAACACCACCGCCTTTTACGAGAACTTTCCCCACAAGACCCACATTGCCATGTTC
AAGGTCTACTACCTGCTGCAGGCTGCCTTCTGGGGCCAGCAGAGCGTGATTCTGTGCATG
CAGCTGGAGAAGCCCCGAAAGGACTTCAAGGAGCTCGTGTTCCACCACATTGTCACCATT
GCTCTCATCTGGTGCTCGTACCGATTCCACTTCACCTGGATGGGTCTGTGTGTCTACGTG
ACCATGGACGTGTCTGACGTGTTCCTTGCCGTCTCCAAGACCCTCAACTACGTGGATCAT
GCCATCACCGGTCCCTTCTTCTTGGTCTTCATGGGCGTCTGGGTCTACACCCGTCACTAC
CTCAACCTCAAGATCCTCTACTCCATTCTCACCGAGTTTGCCACCGTCGGTCCCTTTGAG
CTCAACTGGGTCACCCAGCAGTACAAGTGCACGCTGTCGCAGCGAATCACCTTCTGTCTT
CTGGCGGCTCTGCAGCTTGTCAACGCCTACTGGTGCTTTTTGATCTTCCGAATCGCCTAC
CGGTTCATTTTCCACGACATCCAGAAGGACGAGCGGTCCGACGATGAGGACGAGGACGAG
GACGAGGATGAGTCCAAGAAGGATAAATAAGCGGAAAGCTCAAAATCAGCCGGCCCTAAT
AGATAGAGGCCCCCTTCAGATCCTAAATGTATATAGCTATAGGTGAAAAAGATTGAAAAT
ACTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06424g_CDS-001

Protein length: 430 aa.
Product: Ceramide synthase complement
Gene: LAG1

>YALI0F06424g_CDS-001 MSQPSSPSQPTRRRSSMGTIALGDNSGPALATMPENVQQARASKARQRAISNTSLDDRKA
PAGTSSSAVVDQDDKPLGPLAYLWTSYREYSYQNTWLNPLLTMLVVVGAYYAQGNPGPQN
PLHRFIFPSYKLAPHTELNPTDDYMYGKGKRDFTFVGFYMIFFTFFREFVMQMFLKPFAT
FCGVTKKGKVNRFMEQTYSIIYYSLAGSFGLYIMYQTPIWFFNTTAFYENFPHKTHIAMF
KVYYLLQAAFWGQQSVILCMQLEKPRKDFKELVFHHIVTIALIWCSYRFHFTWMGLCVYV
TMDVSDVFLAVSKTLNYVDHAITGPFFLVFMGVWVYTRHYLNLKILYSILTEFATVGPFE
LNWVTQQYKCTLSQRITFCLLAALQLVNAYWCFLIFRIAYRFIFHDIQKDERSDDEDEDE
DEDESKKDK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG