YALI0F06226g

Overview

Description weakly similar to uniprot|C5DSJ5 Zygosaccharomyces rouxii ZYRO0C00638p
Locus type CDS
Locus tag YALI0F06226g

Location

Species Yarrowia lipolytica Positions 928855..929590
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 736 (nuc.)
Previous locus YALI0F06204g Next locus YALI0F06248g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06226g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06226gYALI0F06226g_mRNA-001YALI0F06226g_CDS-001

Nucleotide sequence

 

>YALI0F06226g
ATGGCCCCGCGAAAAACACGATTGCCCGCTGTCATTGGGGCCGCAGCTGCCGCCGCCGCA
GTTGCATACCTCGTTTATTCGTTTGTTGCCAAGAGCAACTCAGACCAAGACACATTTGAT
AGTTCAGTACAGAGCTCGTCCAAGTCCAGCACAAAGAGCCCCAAGTCGACGGCCACCAAT
AGCAAAATCACCGTCGTGGTGTCACAGGAGCTGGTTCAATCGCAGCTGGTCGACTTCAAG
CATCTGATGAGCGTCCATCCCAACCTGGTGGTCATTGTGCCTCCCATGGTTGCCAACAAG
TTCCATCGGGCTCTGAAATCGAGCGTGGGACACGATCATGGCGTCAAGGTGATTCGGTGC
GACACAGACGTGGGAGTTATCCACGTGATCAAACACATCCGGCCAGATCTGGCTCTCATT
GCCGACGGAGTGGGAGACAACATCCAGGGAGAGATTAAACGGTTCGTGGGATCAAGTGAG
GCTTTGAGTGGAGATGTGAATCTTGCTGCGGAGCGACTAACTGGATTGTAACGGAAGCAA
ATGGCCATAGGTCATGAGCTGACAACATCCAGTCTGGTTGCCATGACACTGCCACTCCAT
TGCGTTGGCCATACTGTGGAAAGGTACCGTTCTGGCTACGCTACCTCTGACTATGCCACC
AACGTTCCAAGTGTAGACAGACTGTGTAAATAAATGGACTTATCGTATTGAATGACTGAA
ATACGTTACAAGTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06226g_CDS-001

Protein length: 177 aa.
Product: Conserved hypothetical protein

>YALI0F06226g_CDS-001 MAPRKTRLPAVIGAAAAAAAVAYLVYSFVAKSNSDQDTFDSSVQSSSKSSTKSPKSTATN
SKITVVVSQELVQSQLVDFKHLMSVHPNLVVIVPPMVANKFHRALKSSVGHDHGVKVIRC
DTDVGVIHVIKHIRPDLALIADGVGDNIQGEIKRFVGSSEALSGDVNLAAERLTGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG