YALI0F06248g

Overview

Description weakly similar to uniprot|Q01926 Saccharomyces cerevisiae YOR334w MRS2 RNA splicing protein and member of the mitochondrial carrier
Locus type CDS
Locus tag YALI0F06248g

Location

Species Yarrowia lipolytica Positions 929676..931341
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1666 (nuc.)
Previous locus YALI0F06226g Next locus YALI0F06259g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06248g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06248gYALI0F06248g_mRNA-001YALI0F06248g_CDS-001

Nucleotide sequence

 

>YALI0F06248g
ATGAACCGGTGGACCAGATGTTGGGGGATCACCAACATAGCTCGACGACCAAAGCAGGTG
AAATGGGGCGCGGCGGGAGTGAATATGCTGCGACCAACAACTCGCGCCCTGCCACTTGCT
CAGAAAATCCACCAAGCCAGTGTTTTCAGAAAGAACGATGATTTGGATGACAAGAGACAG
AAAAATCCTGATTTCAACAGAGACAGAAACAGCAATGAAATGGAAAACCATGAGGACGGA
GAGGAACACCAGAGGCTCGAGGCTGAACACTCAGCGGCCGAAGAAGACATCTCCGACGCC
GAAGAACACATGGACGAGGAGGAACATAAAGATCACCAGGAAGAGGAGGACCCTCATCAC
TTTGCATTTTCAGACAATTATTCGGAGGCCGTTCTGGGAGGCGAAATCTCGGCCACGGTT
TTTGATGTGACAGGCAAGGTGGTCCACGTTGCACACAAAATGACCAAGTATGAGTTTCTG
CTGGAACATGGCCTTTACCCTCGAGACTTGAGAAACATTGATCCCAGCCCTGTTTCTATT
ATTCCTTCGATTCTGGCACGAGGTCGCAAGGGAGCTGGACGATGCATCCTTGTCAACTTG
TTACACATTAAGGCTCTGATTCTCCACGACAAGGTGCTTATCTTCGACACCCATTCCAAG
AACAAAAGTGATACTCACCGACTGGGCATGTTTCTGTACGAGCTGGAGAACAAGTTGAAG
CCGACAATCAACCCAGAAAAGATGCATACGGACATGACGGTGCTGCCGTTTGAATTGCGA
GTACTGGAGGCGATTTTGGTCAACGTTATGACGACTCTGGATGGAGAACTTCAGGTGCAT
CTTAAGACCCTGAACGAGATTCTGGTGGGTCTGGAAGATCATGTGGACCGAGAACAGCTC
AAGGAGCTGCTGATTGGAAACAAAAATGTGTCGCGATTCTACCAGAAGGCTGTTTTGATT
CGAGACGTCCTGGAAGAGTTACTGGAGTCAGATGACGATCTACAGCAGCTGTATCTGGGC
ACTCACCCGAAGGAAGGGCTTGCGGAAGTCGAGCTGCTGATTGAGTCGTACTGCAAGCAG
GCCGATGAGATTGTCCAACAAGCCTCCAACGTGCGATCTCACATTCGATCAACCGAGGAG
ATTGTCAACATCATTGTGGACGCGAATCGAAACGCTCTGATGCTGTTGGAGCTCAAGGTG
ACCATTGTGACGGTCGGTTTTGCGGTCGGGGCCTTTGTGGCTGCGCTGTACGGTATGAAC
TTGGAGAACTTCATTGAGGAAACCAACGAGGGAATGGTTCTGGTGGTGGGTGTGGCGTGT
CTGGGCGGTCTGCTGGTAACGTGGTTCAACCTTACCAAGCTACATAAGACGCAGAAGATT
GCCATGTTCAGCAACGCCGCTACCCACACTGCCAGCAAGCCGTACATGTTGCAGTGGATT
ATCGGTTTACTGAGAAGAAAGCGAACCAAGAGCAGGTTTGACAATATCGACATGAGCAGA
CCAAAGATGAAGGGCAAAAAGTCCAACATTCTGCATCAGTTGACCAAGATGACGGGCAAG
AGGAGATAGATAGACGTAGACACCATGCACAACAACTCCCCTTATTTATAATAGATATAG
ACGGTACATATAACACATTGAATGAATACAGTAGGTCCTTTTTCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06248g_CDS-001

Protein length: 523 aa.
Product: Conserved hypothetical protein

>YALI0F06248g_CDS-001 MNRWTRCWGITNIARRPKQVKWGAAGVNMLRPTTRALPLAQKIHQASVFRKNDDLDDKRQ
KNPDFNRDRNSNEMENHEDGEEHQRLEAEHSAAEEDISDAEEHMDEEEHKDHQEEEDPHH
FAFSDNYSEAVLGGEISATVFDVTGKVVHVAHKMTKYEFLLEHGLYPRDLRNIDPSPVSI
IPSILARGRKGAGRCILVNLLHIKALILHDKVLIFDTHSKNKSDTHRLGMFLYELENKLK
PTINPEKMHTDMTVLPFELRVLEAILVNVMTTLDGELQVHLKTLNEILVGLEDHVDREQL
KELLIGNKNVSRFYQKAVLIRDVLEELLESDDDLQQLYLGTHPKEGLAEVELLIESYCKQ
ADEIVQQASNVRSHIRSTEEIVNIIVDANRNALMLLELKVTIVTVGFAVGAFVAALYGMN
LENFIEETNEGMVLVVGVACLGGLLVTWFNLTKLHKTQKIAMFSNAATHTASKPYMLQWI
IGLLRRKRTKSRFDNIDMSRPKMKGKKSNILHQLTKMTGKRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG