YALI0F06204g

Overview

Description weakly similar to uniprot|P22193 Schizosaccharomyces pombe DNA repair protein rad1
Locus type CDS
Locus tag YALI0F06204g

Location

Species Yarrowia lipolytica Positions 927148..928071
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 924 (nuc.)
Previous locus YALI0F06182g Next locus YALI0F06226g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06204g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06204gYALI0F06204g_mRNA-001YALI0F06204g_CDS-001

Nucleotide sequence

 

>YALI0F06204g
ATGCCAACACTGCTCTTTTCAGGAACAACAACATGTGTGTCGCACTTGTACACGATTCTC
AAGGCGATTGCGCTCATGTCCAAGCATGTGAGTCTCGAAATCATGTCTGACGGGTTCAAG
TTCACCGTGGATGTGGACAGCAGATCCAGTCAGGCCGTGGTGCTGGTCAAGAAAAACCTG
TTTTCGATGTACAACTTCAACGATCAGGATGCCGAAGGATCTGATGACGAGCCCGCCTTC
TTTCCACCCTACAGATTGTCTCTAGCTTCGCTGACCACGTGTCTCGAGATGTTTGGCAAG
AATGACGTGATTAGTGACAAAGCGGGAGGTAATGCTGAGGACCGAAGAGTTGATTCTTCG
GGAGCATCGCAGACGTGTCGAATCCTTTACTCTGGGCCAGATCACCCGCTCAAATTCGTG
TTTCGAAACGACCAGTTTACGACTTCGTGTGAATTTCTGAATCAGGATACAGACAAGCAG
TCGGAGAGTCTGAATCTGGACCCCAGCGAGGTGGTTCTCAAGGTGATTCTGTCGGCGCAT
CTGCTGACCCAGGCTCTTCGTGATTTGGAAGGTGCCAAGTCGCAGTATGTGCGGATAATA
GCTCAGACTAGAGCGATTCCTCATTTCAGATTGGAGAGCACGGGCGAGTTTGGACGCAAC
GTGATTGCTTATCCTAACGAGAGAAATGTTTTGGATACCTTTGTGATTGACGACCCGGAC
CAGGATCCAGAGGGAAACGTCATTGTACAATCGGGATACCTATTTGGTGAGCTGGTCAAG
TGCAGAGAGGCCGTGGGGGTCAGTGAAAAGGTGTGTCTGCGAATGGACGTGTACGGGAGA
CTGTCGGTTCAGAGTATGTGTGTGGTTGATGAGGCCAGGAAGACGTTTGTGGACTTTCGG
TTTAATGCTCATGACGAATATTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06204g_CDS-001

Protein length: 308 aa.
Product: Conserved hypothetical protein

>YALI0F06204g_CDS-001 MPTLLFSGTTTCVSHLYTILKAIALMSKHVSLEIMSDGFKFTVDVDSRSSQAVVLVKKNL
FSMYNFNDQDAEGSDDEPAFFPPYRLSLASLTTCLEMFGKNDVISDKAGGNAEDRRVDSS
GASQTCRILYSGPDHPLKFVFRNDQFTTSCEFLNQDTDKQSESLNLDPSEVVLKVILSAH
LLTQALRDLEGAKSQYVRIIAQTRAIPHFRLESTGEFGRNVIAYPNERNVLDTFVIDDPD
QDPEGNVIVQSGYLFGELVKCREAVGVSEKVCLRMDVYGRLSVQSMCVVDEARKTFVDFR
FNAHDEY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG