YALI0F06182g

Overview

Description similar to uniprot|P46669 Saccharomyces cerevisiae YOR340c RPA43 DNA-directed RNA polymerase I, 36 KD subunit
Locus type CDS
Locus tag YALI0F06182g

Location

Species Yarrowia lipolytica Positions 925416..926455
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1040 (nuc.)
Previous locus YALI0F06160g Next locus YALI0F06204g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06182g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06182gYALI0F06182g_mRNA-001YALI0F06182g_CDS-001

Nucleotide sequence

 

>YALI0F06182g
ATGGTCGCCAAAACGATTTCGGAGACGCAAGAGGTGCTGAAAAGCATGGCTCTCAAGCGT
AAAAACCCCGTCGACTCGGCCACCGGAATCTCCGAGTGTTTCCACAAGGTCTCGACCTCC
ATGTATGTGTCTCTGGCGCCCATGTTCAGCCAGAAGCCCGTGGCTGGCATCAAAAGCCAG
CATCTGGACCCACTGGTGGCCCGCTACTTTGCTCCTGCGGGCGGCGTGGTTCTGGCACAT
TACAACCTCAAGCTGTACAAACGGGGAAGCGACTCTGAGGGCTCTGCTGTCATGGGCAAG
TTTGTCAACGAGTCCCCATTCACCTTCATGTGGATTAGTACAGACCTTCTTGTGTGGAAG
CCTCAGGTCGGCGACCGTCTGGAGGGATACGTAAACATGCAGACTCCTTCTCATATCGGT
CTTCTTGTCCACGACACCTTCAACTGTTCCATCAAGTACGCCAACATTCCTGAGGACTGG
GTCTTCACTCCCTTTGCTGAGTCAGGACAGCCGACAGCCGCCAAGAAGGACCGAGTTCGT
CAGTCCATGGGCTACTGGTCGGACGGCTCTGGCAAGCGAGTCGAGGGCAAGCTGGAGTTC
ATCATCAAGAGCGTTCACACTGCCAACATGGTTTACCTGTCTGGTTCTCTGGTTGATACC
TATCCCGCACAGTCAGGGGGCGCTGTGAGCGAAGAGCCCCAGCGAAAGAAGACGAAATTC
ACAGACGAGGATCCCATCGAGGAGATTGCCGAGGAAAAGGCAGAGGAGGAAGATAAGGAG
GTTGAGCAGAAGGAGGAGGACGCCGCACAGGCCAAGATTGGCTATGATAGCGACAGTGCT
GCAAGTGACGATAGCGACAGTGATTAGAGGAGGAGAGCGAGCTGAGATAAGAAGCGAGCT
GAGGCGAGGGAGCTCAGAAAAGCAATGTTGAAATGAGCACGTTCAGAAAAAAGGAGGGCA
TAGAGTGTATATATAACTAACGGTGAGAGGTGGAGGAGGGATGAGTGCTCAAGCGCTTGT
TTTTCTACACTTTTTAGTAT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F06182g_CDS-001

Protein length: 289 aa.
Product: RNA polymerase I subunit A43, putative

>YALI0F06182g_CDS-001 MVAKTISETQEVLKSMALKRKNPVDSATGISECFHKVSTSMYVSLAPMFSQKPVAGIKSQ
HLDPLVARYFAPAGGVVLAHYNLKLYKRGSDSEGSAVMGKFVNESPFTFMWISTDLLVWK
PQVGDRLEGYVNMQTPSHIGLLVHDTFNCSIKYANIPEDWVFTPFAESGQPTAAKKDRVR
QSMGYWSDGSGKRVEGKLEFIIKSVHTANMVYLSGSLVDTYPAQSGGAVSEEPQRKKTKF
TDEDPIEEIAEEKAEEEDKEVEQKEEDAAQAKIGYDSDSAASDDSDSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG