YALI0F06160g

Overview

Description highly similar to uniprot|P48589 Saccharomyces cerevisiae YOR369c RPS12 Protein component of the small (40S) ribosomal subunit
Locus type CDS
Locus tag YALI0F06160g

Location

Species Yarrowia lipolytica Positions 922982..923689
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 708 (nuc.)
Previous locus YALI0F06138g Next locus YALI0F06182g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06160g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06160gYALI0F06160g_mRNA-001YALI0F06160g_CDS-001

Nucleotide sequence

 

>YALI0F06160g
ATGGTGAGTATGACAGAGGGAATCACGAGGCCATCTTGGTGAGGATGTCGAGCGATCCAA
ATGGAGAAACTATGGGATTTGTCTCATTTATTTGCAAGGAAAAATGAAGCAAATCATTGA
CATAATCTCTCGAGGTCGCTCAAAAAGCATCCAAATCGTTATCCGAACGAAGTCGAAACA
AACGACAATCACTCGCTGCCATCATTCTAACCCAGTCTGATTCTGAAGTTATCGCTGAAG
TTGAGGTTGCCGCCGCTGCTCCCTCCGGAGGACTTACCCTCGAGGATGCCCTCAAGACCG
TCCTGAAGAAGGCTGTCATTAACGACGGTCTCGTCCGAGGTCTGCGAGAGTGCTCTAAGG
CCCTTTCTCGACGAGAGGCCGAGCTCTGTGTCCTGTGTGACTCTGTCACCGACGAGTCTT
ACCTCAAGCTCGTTGAGGCTCTTTGCAACGAGCCCGAGGAGAAGATCCCCCTTGTCAAGG
TCCCCGATGCCAAGCAGCTCGGTGAGTGGGCTGGTCTCTGCCAGCTCGACCGAGAGGGTA
ACGCCCGAAAGGTCGTCGGTGCTTCTTGTGTCGTCATCACCAACTGGGGTGAGGACTCCG
AGGCTCGACAGTTCCTCCTCGACTCCATTGCTTCTCAGTAAATGCGTTGCAATCAAAAGC
GTAAGCAATAAAATGCCACATGGCTTATTTAATATCTGAGAGATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06160g_CDS-001

Protein length: 143 aa.
Product: Ribosomal 40S subunit protein S12, putative

>YALI0F06160g_CDS-001 MSDSEVIAEVEVAAAAPSGGLTLEDALKTVLKKAVINDGLVRGLRECSKALSRREAELCV
LCDSVTDESYLKLVEALCNEPEEKIPLVKVPDAKQLGEWAGLCQLDREGNARKVVGASCV
VITNWGEDSEARQFLLDSIASQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG