YALI0F06138g

Overview

Description some similarities with uniprot|P39731 Saccharomyces cerevisiae YAL034W-A
Locus type CDS
Locus tag YALI0F06138g

Location

Species Yarrowia lipolytica Positions 919562..921051
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1490 (nuc.)
Previous locus YALI0F06116g Next locus YALI0F06160g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06138g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06138gYALI0F06138g_mRNA-001YALI0F06138g_CDS-001

Nucleotide sequence

 

>YALI0F06138g
ATGAACGACTCGTTTATCCGCACTACCAGCATTCTGACAGAGCATTTCGGCTATGCGCCG
ATTGCTGTGGTCGACGATGTCATCAACGCGGTCAACCAGGTGCTATATACCGTGACCGAC
GCGATGGAGGACTTTTTGAAAACGCGCCAGGCCCGACACCTTCAAAAAATCGAACAGACC
GCCAGAGACGCGTCCGACTACCAGCTACGCGTCGCCGAGCTGCCAACGACTAAGGAAATT
GAAATCGGAACCGCCAAGATGGAGACGCTGCTGGAAACCAAGGTAGACGAGAAGTTTGAT
CTGTTTGAGCTCGACGCGTTGCGAAACGTGTTCAACGTGCCCTCTGAGCTAGTTGAAGGC
GGCTGGTTCAAACTGGAGCACCACACGTTTGATGCCAAGAGCGTTTCCAAGGTCAACGAG
GACGCAGAACTCGACAGAGAGATTGCCAGGCTGGAACACGAGCTGTTTGGAGGAGAAGAG
TCTTTGATGCGACAACAACAACGGCTCAAGCTGGAACTCAACCGACTGAAAAGAATAGAG
GCCACGGTCGCACGGTGTGGATCGAGCTTCTCTTTTCTCACAGATAGGAGTTCTGAGGCT
AGTAAGTTGTATAGGGATGTTGTTCCCTTGGCGGAGAGTGTGCAGTTCCTGGTTAATTCT
ACTAGGGGACTTGAACCCCAAGTACGTACGGCCAAGAGGAGACGGATCGACAGAGTCAAT
CTACCTGCGTCTGCCAGAGATCAGTATCTGGATACAGTCACGAACCAGGCTATTTTGAAG
GCTGGCTTGTGGTCTGGACTGGACGATGAGCAGGTGTCTCTAGCTGCTGAGTTCGCAAAG
AGGGATCAGAGAGAGCAATATCATAGTGAAGAGCAGGAGCAGGAGCAACAGCAACAACAG
CTGAAGGGGCACGAGGGAGTGCAGGAAGGAGAGCAGGAAGGGGAGCAGGAAGGAGAGCAG
GAAGGAGAGCAGGAAGGAGAAGAACAGGATGAACAGGATGAACAGGGTGCACAGGACGGA
CAGGATGCACAGGACGAAGGCCAACTAGAGGGACAGCAAGAGGAACAACAAGGAACTCAG
CAAGAGGAGCACCAGCAAGAGAATAACCCACAGCAAGAGAATGTCGCCTCACGAGAAGCA
CAACAACCAACCACTTCATTGCCATCTCTATCACCACCTCCAGACCCTCCCTCTGAACTG
GATCCTGACGAAGACAAGGAGAACAAAGCTCCTCGAAATACAAACACTCAGACGGTTTCC
ATGGAGGATTTGGCCCAACCTGAACCTATGGCTGAACCTGATGGCGAAGTCGAACCAGAG
ACAGATCTCCTGGGTTCAGAAGTAGCCCTCTCCTCAGATCCCCTCATCTCGTCAGACTCT
TTGGTCCATTCAGAGACTGAAATGGAACTGTTCGAGGTAAGTGTTGATTAGTCCACTGAG
TGTCATTCCATAAATACTAACCATGTACACTAATATATACTAACGTTCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06138g_CDS-001

Protein length: 477 aa.
Product: Conserved hypothetical protein

>YALI0F06138g_CDS-001 MNDSFIRTTSILTEHFGYAPIAVVDDVINAVNQVLYTVTDAMEDFLKTRQARHLQKIEQT
ARDASDYQLRVAELPTTKEIEIGTAKMETLLETKVDEKFDLFELDALRNVFNVPSELVEG
GWFKLEHHTFDAKSVSKVNEDAELDREIARLEHELFGGEESLMRQQQRLKLELNRLKRIE
ATVARCGSSFSFLTDRSSEASKLYRDVVPLAESVQFLVNSTRGLEPQVRTAKRRRIDRVN
LPASARDQYLDTVTNQAILKAGLWSGLDDEQVSLAAEFAKRDQREQYHSEEQEQEQQQQQ
LKGHEGVQEGEQEGEQEGEQEGEQEGEEQDEQDEQGAQDGQDAQDEGQLEGQQEEQQGTQ
QEEHQQENNPQQENVASREAQQPTTSLPSLSPPPDPPSELDPDEDKENKAPRNTNTQTVS
MEDLAQPEPMAEPDGEVEPETDLLGSEVALSSDPLISSDSLVHSETEMELFEVSVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG