YALI0F06116g

Overview

Description similar to uniprot|P32864 Saccharomyces cerevisiae YOR370c MRS6 Rab escort protein
Locus type CDS
Locus tag YALI0F06116g

Location

Species Yarrowia lipolytica Positions 917668..919468
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1801 (nuc.)
Previous locus YALI0F06094g Next locus YALI0F06138g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06116g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06116gYALI0F06116g_mRNA-001YALI0F06116g_CDS-001

Nucleotide sequence

 

>YALI0F06116g
ATGTCTTCTTTCTCAGCATCATCGGTATCCAAACGAGGATCAATTGTGCCGCCACTGGCA
GAGGACCCCGCGTTTGTAGACTCTTGCGACGTGCTCATCTGTGGCACGGGCATCGTCGAG
TCAATTCTTGCGGCCGCCCTCGCATGGCAGGGCTCCAACGTGGCTCATCTGGACCGCAAC
TCCATCTACGGTGACTCGTCGGCAGTACTCAATCTCGATGAGCTCCCTAGATGGGTGGAC
GAGGTCAATTACGAGTCCGCCGTCTTCTCCAACGCCAAGTTGTACCAGCCCCGACCCCTG
GACTCCAAAAAGTACTTTGTGGACCTGACCCCACGGGTGCTGTTTGCCAAGTCGGACATG
CTGCAACTGCTGCTCAAGAGCCGGGTCTACAAGTATCTGGAGTTCCGGTCACTCACCAAC
TTCCACACGTACGAAAACGACAGCTTCGAAAAGGTGCCGGCGTCCAAACAGGACATCTTC
ACGTCCCAGCAAATGTCGCCCGTCGTTAAGCGTCAGCTCATGAAGTTCATCAAGTTCACC
GTCGAGTGGGAACGTCTCTACAACGTCTGGGGACCCTACCGAGACAAGCCCGTTGTCGAG
TTCATGACCAAGGAGTTCCAGCTGGAACAGACCCAAATCGATGAGCTGGTCCAGTCCATT
GGCCTGTGTTCTTCCAACGATGTCGCCACCCCCGTCGCCCTCCACCGTATCAAGCGGTAC
CTGGTCTCCCTCGAGACCTACGGCGCGTTTCCCGTGGTTTACTCCATGTACGGATCTGCC
TCCGAGCTGTCGCAGGGATTCTGTCGATCAGCCGCTGTCGGCGGAGCCGTATACAAGCTC
AACGCAACCCTCACCGGGCTCGACGTGGACTCCAAGACGGCTATCTTCAACGATGGCTCC
AAGGTGCGATGGTCCGAGAAGCTGGTGGTGTCCGAGGCCCAGATCACCGAGCAGGTGCGC
TCCAAGATCCCTTCGTCCAACCCTGAGTACCAGATCAACCATCTTACGGTAATTGTCAAC
ATGGACTGCAAGGAGTGGTTCGCCGAGGGCGAGGACGCGGCCATCATCGTGTTCCCCGTG
GGCTCTCTGTCGTCCGGCAACACTAAGACTGTGCAGGCCATCTGCTACGGTGCCGAGTCT
GGCCAGGTTCCTCCTGGTCAATGTATCTGGTACCTCTCCACTGTCCAGGGAGGAGCCACA
GGCCAGCGGGACCTAGAGGAGGCACTGTCCAAGATGGAGGCATCGATTCTGCGGGAGTCG
ACCGAGGACTTTGAGTTCCAGGTGGACCAGTCGGATGTTATTTTCACGCCGTCCGGCGAC
CCCGTGCTATCGTCCGTGAAGCTCGGCAAGTCCATGAAGGATTTTGTACCCGAGAAGAAG
CTGACGTATCTGATCAAGCTGTCGTACAACCAGAAGACGTCGATTCCGCCGCTGGAGGAG
AGCATCAAGGATGTTGCTAAGAACGATGGAGACGAGAGTCCTGTGATTGTGACCTCAGGT
GCACCAACGGAAATCACCTATGACGGCATTGTGGAGCAGGTCAAGAAGATCTACGCGCAG
ATCGTGGGTTCAGACGACGACTTTTTTGACGTTGACTTTGAAGACGACGAGGAGGACGAG
CTGACGGGAATGGCCAAGCAGAATAAGAAGCAGGAGGACGACGATCACGTGCCCGACTTT
GGCGATGACATGGAGCTGTAAGACGGGTTCCACATTGGATATACGATATAGATATTTATA
GGGCTGTACGTTACTAGTGCAGTTCTGCTCAACATAAGTTAAGCTAGATGATGTTATGAC
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06116g_CDS-001

Protein length: 567 aa.
Product: Rab escort protein, putative

>YALI0F06116g_CDS-001 MSSFSASSVSKRGSIVPPLAEDPAFVDSCDVLICGTGIVESILAAALAWQGSNVAHLDRN
SIYGDSSAVLNLDELPRWVDEVNYESAVFSNAKLYQPRPLDSKKYFVDLTPRVLFAKSDM
LQLLLKSRVYKYLEFRSLTNFHTYENDSFEKVPASKQDIFTSQQMSPVVKRQLMKFIKFT
VEWERLYNVWGPYRDKPVVEFMTKEFQLEQTQIDELVQSIGLCSSNDVATPVALHRIKRY
LVSLETYGAFPVVYSMYGSASELSQGFCRSAAVGGAVYKLNATLTGLDVDSKTAIFNDGS
KVRWSEKLVVSEAQITEQVRSKIPSSNPEYQINHLTVIVNMDCKEWFAEGEDAAIIVFPV
GSLSSGNTKTVQAICYGAESGQVPPGQCIWYLSTVQGGATGQRDLEEALSKMEASILRES
TEDFEFQVDQSDVIFTPSGDPVLSSVKLGKSMKDFVPEKKLTYLIKLSYNQKTSIPPLEE
SIKDVAKNDGDESPVIVTSGAPTEITYDGIVEQVKKIYAQIVGSDDDFFDVDFEDDEEDE
LTGMAKQNKKQEDDDHVPDFGDDMEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG