YALI0F06094g

Overview

Description weakly similar to uniprot|C7YIF6 Nectria haematococca hypothetical protein NECHADRAFT_75303
Locus type CDS
Locus tag YALI0F06094g

Location

Species Yarrowia lipolytica Positions 907670..909581
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1912 (nuc.)
Previous locus YALI0F06072g Next locus YALI0F06116g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06094g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06094gYALI0F06094g_mRNA-001YALI0F06094g_CDS-001

Nucleotide sequence

 

>YALI0F06094g
ATGGCTCTGGTCAAACGAATAACAGAGTACCGACCACGACACGCTGCCGTGGCAGAGATT
CCAGACCCGCCATCGACCTCGCATCAGTTCTCAAACAACTTTGTCTCAACCCAGTATCTC
ATGACTCGAACGTCGCCCATCCGACCCTACCCCAAGCTGGACACCGACTCTGTCACTCCC
CAGCTGCCCAGTGACGAGCTGGGATGCGTGGCCCTGCTCAAAGAATGGAGCTTCTACGAC
GTGTCCTACGTCAACAAGGACGAAGCCATCCGACCCCCTTCTCCCCCCTTTGACACAAAA
CGAGGAGTCGCAAACACAAAAACCCCCAACGGCCACTCGTCGCGTACAAACAGCATGGGC
TCGCGCTCCGTGTCATCCACAGAGGATGCCAATTCGCTCTACTCCCACCCCCTCACGCGA
CACACCTCCGTGACCTCCTCCACGTCCGTGTCTCCCAACAATCACCAGTACTACAAGCAG
AGCCTTCCCCCGCTACCAAGCGACACAAACAGCACCGACCGAGAGCAGCCTCCTTCGCGA
CCGGCCTCTGTGTCCACCTCTTTTGCATCTTTCCCCCGGCCCCAGCAGCTGTCTGAGCTG
GCCACCTCTCTCGCTCGAGCTCCTGCAATGTCCACTTCCGCCATTGAGCAGCAACCTGAG
TCCCCCACATCCACAGAACTGCTGGAACCCTGCATCCCCCCCATGGTACCCTATTCGTAC
CACCCCCGCATCTACGGCTCGGACACCCCTCCCCAGGTGTACGGCCACTCATCTACTACC
GTTGGCGCCAAGATCTTCTCGTTTGGAGGCACCAACGGCGCGCAGTGCACAAACGACATG
TACTGCTTCAACACAGACGCTCACACGCTCAAGAAGATCGACCGTAGTGTGCGTCCCGAG
GTCATGAGAACTGTTCCTCGAGCCGCATACAGACGTCGGTCCTTCAATCGTACCGAGACC
GACGGTCCTGCCACCAACACCACCTCGACAGTGAAGCCTGCTCCCCGAAAGTTCCACACC
GGAACCACAAAGTACATTTCTCTCGTGCCTGGCGTCCCCAAGCGACACGGTGGCGTAGAC
ATTTTCTACTTTGGAGGCGGCGACGATACCCAATGCTTCAACGACGCCTTTCTGTTCAAC
ACTCGAACGCATCTGTTCCGAAAGGTGGCCGACGGGGCCTCCGAAACGCGACCTGCTCCT
CGACAGGGCCATGTGACTATCAACCGAGGCGTATACTTTTACGTTCATGGCGGTCACAAC
CCCTTCACCGGCGAGACATTCAACGACATGTGGCGGTTCGACACTGTGAGTAACAAGTGG
TCCGAGGTTGTCTACCAGACCCCCCAGGAGGCTCACCCTGCCGCAGCCTATCACGATGGT
TGTTTCTGCGAGCGAGAGGGCTACTTTTTGTTCTACGGTGGCCGGTACGAGGACGGAACC
GTGTGTTCGCAGATGACCCGGTTCTATCCCGAAACCACCTCGTGGTCTCCCGTGCCCGTC
TTCATCTACAACAAGTTCACCGGCCAGGGCATGCGAGTGTCTCTGGGCCGATACGGACAC
AAGATTATGAACGGCGGCAAGTGGGTTTACATTCTGGGAGGCGACAATGGCGACGGCCAG
GTGACGGACATGTGGGTCTTTTCGCTATCCACTGGTGTCATGATCCGGTCTTGTTATTAC
GGCGTTCTTCTCAAGGGTCTGTCTCATCACACGACAGCCTTTTGCGACGGGCGTCTTTAC
TTTTTTGGAGGACTCAACACCTCAGCTGAACGGCCCGAGGTGGTTTGTGAGATTCGATGC
ATCGAGCTGCCTCTATCTGGCACCTGTATGAAGGAGGAAGATTAGGTGAGATAGAGCAGC
CGCTTATTTATATGTACATTAGACAATAGAATAGATTTTGAAGTAATTTCGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06094g_CDS-001

Protein length: 615 aa.
Product: Conserved hypothetical protein

>YALI0F06094g_CDS-001 MALVKRITEYRPRHAAVAEIPDPPSTSHQFSNNFVSTQYLMTRTSPIRPYPKLDTDSVTP
QLPSDELGCVALLKEWSFYDVSYVNKDEAIRPPSPPFDTKRGVANTKTPNGHSSRTNSMG
SRSVSSTEDANSLYSHPLTRHTSVTSSTSVSPNNHQYYKQSLPPLPSDTNSTDREQPPSR
PASVSTSFASFPRPQQLSELATSLARAPAMSTSAIEQQPESPTSTELLEPCIPPMVPYSY
HPRIYGSDTPPQVYGHSSTTVGAKIFSFGGTNGAQCTNDMYCFNTDAHTLKKIDRSVRPE
VMRTVPRAAYRRRSFNRTETDGPATNTTSTVKPAPRKFHTGTTKYISLVPGVPKRHGGVD
IFYFGGGDDTQCFNDAFLFNTRTHLFRKVADGASETRPAPRQGHVTINRGVYFYVHGGHN
PFTGETFNDMWRFDTVSNKWSEVVYQTPQEAHPAAAYHDGCFCEREGYFLFYGGRYEDGT
VCSQMTRFYPETTSWSPVPVFIYNKFTGQGMRVSLGRYGHKIMNGGKWVYILGGDNGDGQ
VTDMWVFSLSTGVMIRSCYYGVLLKGLSHHTTAFCDGRLYFFGGLNTSAERPEVVCEIRC
IELPLSGTCMKEED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG