YALI0F06006g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F06006g

Location

Species Yarrowia lipolytica Positions 890717..892996
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2280 (nuc.)
Previous locus YALI0F05984g Next locus YALI0F06028g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06006g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06006gYALI0F06006g_mRNA-001YALI0F06006g_CDS-001

Nucleotide sequence

 

>YALI0F06006g
ATGACCGACTCGGAAGTGTGGCCCTTTTCGCTCTCAACAGACCCGTCTCCTCGCCTCGAC
GACGTGCGCCTCATGTCGCCCTCGCCATTATGCCAGCCGTCGCCAGGTCACAACAACACC
AACCCGGGGGCCAACACAAACAACATGCAGTTCGACACGGCCGACTTTCTCGAAATGGAC
ATGTTCGAAGACACGCACGGAGCCCCGAGCGATGGCTCAACCACCAGCGGCACTAGCACC
CATGCCCACGCCTCCAACAAGGCCTGGGATGCCTTTGGGGTCTCCACCCCGTACGTATCC
TACGTGCCATATAAAAAGCGCAGTGACAATGACCTGCTGGACTTTGACTTCATCGACTCG
TCCCATGACCTGATGGGTGTGACCAATATGATGGGTCAGCAGCTGTCACAGCCGCAGCTG
CAGCAACAACACCGTTTGGGCCAACGTCAACTGGACCAACAGTTGCAACGACAACAACAA
CAGCAACGACAGCTTCAACAACAGCAGCAACATCAACGGCAGATGGAGCTCCAACAGCGT
CAACTGGAACAGCTTCAACAGCAGCACCAACAACAGGCCCAGCTGCAAATGAACTTCTCC
TCGTCCTCTCAGCACACTCCCACCCGTCATCCCGGATCATCCCACCCAGGCTACTCGTCC
AGCCCTACCCGGCGCATGCAAAAGACAAAGTCCATGCCCAACCTCAAGCACAAAACATCC
AGCCGCAGACTCACTCAGCAGCCTCCTCTGCCCCTGGATCTTATCCAGCCTGTCATCCCT
CCGACTGAGGGCCAGTCTGGATCTGCAGGAGGCTCTTCCAGCACTGCTCACTCGCCCAAC
AAGGGTCTGACGTTTGTCACTCACGAGTTTGAGCACTATGAGCCTCCAAAGGCGTCCTCC
AAGAGTCCCACCAAGGTGACAAAGGCCAGACTCAACACGAAAAAGAGTGTCAATAACCTC
AAAAAGCGAGAGTCCCAAGAGGTGCTCTCGACCCTCATGTCACGCCAGCTTTCGGGCTCC
AATTCGTCGGCCGTCTCCTCTACCAACAACGATGTCGATGTGACCGTGATGAGCGTGGAC
TCTCCTTCTGCATTTAAGTCCGCCATGAAACAGGTCCAGTCGTCTTCTCCGCGCCGCAAA
AAATCCTCTCCAGAACTCAGGCAGCAGTCCCAGATGTACAAGTCGCCGCCTCCAGTCCCC
CAGCTGTCTCAGCTTCCCATGCCTCAAATGGCACCCCTAACTTCTCCAGTCATGTTGAAG
CAGCAGCAACAACACCAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAA
CAACACATTATTCATACCCCGGACCAGTCTCCTAGACGTGGTTTGAGACACGCTAAATCC
GTGGCGTCGTTTCAGCCCACAGCCTCCATGCCCGGTTTCAATCTCGACAGCCTAGTGAGC
GAAAGCATGCCATCCAAGCCGTCCCACAAGAACGACAAGGAGGCATCGTTCTCGTCATTC
CAGGTCATGCTGTCGCGTGTGGACAACAAGAATGTGCTGATGAATGCTCCTCCACAGACT
CCGGCTCCAGTGGGTGGAGAAATGGGCACCATCGACCTGTCGTCTTCGAGGCGATCGTCA
TTCACCGGTCATGGAGGCTCCCACAGCCAGGACAACCAGCTGTCGCCGCAGTGGAAGTCT
CTGGGCATTCCTGAGTCGTTCAAGACTCCGGTGCGAGCAGCAACCCGACGCAAGTCCAAG
GCGTCTGCTTCCAAAGAGACACCGGTGCAGTCTGCCCACAAGATTCTGCAGGAGATTCCA
ACCATCCCACAGTACGTGGAACCCGCGACCCAACTGGGAAAGTTGAATTTGCATGACTCG
TCACTGGACTTTGAGTTCTTTGACGCGGTCCAGGGCACAGAGCCGTCCAACAGCCTGTTT
GATTATGAGGCGATAGTCAAAGACGAGGGCGGGGCTAGTACTGAGGTCGGGGATTACATC
AAGTGGGATGACGAAGAGTATTTATAAGGTATGGAGTGGATGGATTGTGGATAGGATACG
ATAGTATAGGATACGGTAGTTATGGCCCCTTTCATTTAATAGTAATTAATGCATGTGTAC
AGTATAAAAGTGGGCCAATATTTGAGGTGTCTGGACCTTCTTCATTCGTACTCATGCGAC
CAATGAACGAGGGTCAACAGCTGTCTATCTAATAGTATGACAGGCGGTTTAGTTACGTCT
GCCGAGGTGATTTCAGCACAAGGATTTTATCAATGCCTGTGAATGAGAGCTATGTTTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06006g_CDS-001

Protein length: 669 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F06006g_CDS-001 MTDSEVWPFSLSTDPSPRLDDVRLMSPSPLCQPSPGHNNTNPGANTNNMQFDTADFLEMD
MFEDTHGAPSDGSTTSGTSTHAHASNKAWDAFGVSTPYVSYVPYKKRSDNDLLDFDFIDS
SHDLMGVTNMMGQQLSQPQLQQQHRLGQRQLDQQLQRQQQQQRQLQQQQQHQRQMELQQR
QLEQLQQQHQQQAQLQMNFSSSSQHTPTRHPGSSHPGYSSSPTRRMQKTKSMPNLKHKTS
SRRLTQQPPLPLDLIQPVIPPTEGQSGSAGGSSSTAHSPNKGLTFVTHEFEHYEPPKASS
KSPTKVTKARLNTKKSVNNLKKRESQEVLSTLMSRQLSGSNSSAVSSTNNDVDVTVMSVD
SPSAFKSAMKQVQSSSPRRKKSSPELRQQSQMYKSPPPVPQLSQLPMPQMAPLTSPVMLK
QQQQHQQQQQQQQQQQQQQQQHIIHTPDQSPRRGLRHAKSVASFQPTASMPGFNLDSLVS
ESMPSKPSHKNDKEASFSSFQVMLSRVDNKNVLMNAPPQTPAPVGGEMGTIDLSSSRRSS
FTGHGGSHSQDNQLSPQWKSLGIPESFKTPVRAATRRKSKASASKETPVQSAHKILQEIP
TIPQYVEPATQLGKLNLHDSSLDFEFFDAVQGTEPSNSLFDYEAIVKDEGGASTEVGDYI
KWDDEEYL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG