YALI0F06028g

Overview

Description weakly similar to uniprot|Q8WZV3 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0F06028g

Location

Species Yarrowia lipolytica Positions 894351..899427
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 5077 (nuc.)
Previous locus YALI0F06006g Next locus YALI0F06050g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06028g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06028gYALI0F06028g_mRNA-001YALI0F06028g_CDS-001

Nucleotide sequence

 

>YALI0F06028g
ATGTCTGACGGTGAGTATGGGGCAGCAACGAGAGACGGTGAGGCAGCAGCAGGCGGTCGG
GCGCGCGGGCGCTCAGGCAGCCGCCCAGAAGTTCCAGCTAACACAGATGATGCAGGACTG
GTCGAAATGCCAAACAGCAGCATGATGAGACAATACGACGACGAGTTCCGATACGACTCG
GGCCACAACGACACCGTGAGCACCGCGCCTCCGCTATTCGACCACAAGAGCGCCGGCGGA
ACCGTCAACACGCGTCGAGCCAGCGATTCCGAGCCGGAGTTTTCACATCTCACCACCTCC
ACGGTCGGCACCACAGGAACGGTATCCAAGGGCATGGCCCAGATAGGCAAAGGCTTGCAC
ATTGCCAAGGTTCAAAACAACAGGGTCAATGGGGAGGCCTTCGACAGGACACAGCCTGGA
GAGCCTCAGGCCCAGGCTGCCGGTGGGTATGCTGATCACGACAATGAGGCTGACAATGAG
GCTGAGGCTTCCCATGTTGGAGGAGGGCTGGAATCAGCGCCATGGTTGGAGGAGCTTCAG
GACGAATGGCCCGAGATCAGCAATGACGGATGGGAGAATGAGGACTCTTCCCACGAACGG
GCTGAACACGAGCGAGTCTCTTCTGTCAAGTCGTCGGGGTCCGTTTTGGCTTCTACTACG
AAACAGTCTTCTTCCGTCAAGGCCAGCACTCCCGCCTGGAAACAGATGCTTAACGAGGAG
TCCAAGCGGGAGTCCAATCGCACTCTGCAGCGCATTTTCTTGCCTCCTACCCTCGGCAAA
CGCGTGGATCTGGGAGTCATTGCTGAACACACAGAAACAGAAGACACCAACACTCAAGGA
GGAAGTAGTCCTACAGAGGAGCAGTATTCGGACGCGGCATCAGTCACAGACCAAATGGCT
CAATTGTCCCTAACTCGAACTCCAGAACTTGGTCCTCGAGACTCTCCTTCACGTTCCAAA
TCAGCATCTCCTCTCAAGCTATTTTCCAAACACGACACGTACACGCATTCTCGGTTCGAG
GGGCTTCTTCCACAGCTCGAGGGCGACTCAAGCAGCAGCGGGGTGGACCAATCGTCGTTC
GACAGCAACCGTTTCGCCTCAGACCAGTCGTACAACCAGCAGCAGAAGATGGGGGCTCGC
CAGAACCAGCCCTCGGAGAGTCAGGACTATCTCAACAATGCTGACGACTTGTTTAACCGG
ATCAAACAGGCCAATTTCGCCCAGTTTGAGCCCAACGAGAGCGAATATGACGAGTCCAGT
GATTGGGATAGTCACAGGGATTCGATGAACAGGTCGTTGAATGACAACTACGGACAACAC
AGTCGCGACAGTCGTGATAGCCGTGACAGCCGCGACGGCCATAACTTCCAATCAAGTGCA
AGCGGCATTGAGGGTGGAAATGCTGAAGGTCACGTACGAGCCTACTTCAACTCGGTGAAA
CAACGCCATGAAGTTGGAAACGACAGTCTGGGAGGAAACAATATCAAGGCGTTTGATTTT
GGCAAGACCAACGATACTCACAATGCTCAGAATGCTCGCAACGTTGGGGCTGAATTTGGG
TCCCAGCCTCCAGGTCCAAGTGACACGTCGAATGTCATGGGAAGCTCGCCTCCCGACCTA
AAATCAGAACAACCTCTCTCTCTCCCTAAAACACGACAACTCCAGACCCTGTCTTCTCAG
CCTTCTCAAAATACCTTCTCTTCCGGGTTTTCCCTGTCCTCCGACAAGATGGCTTCTGTA
CATACTACAGCCACGACCCGCAAACTGGGACTCAAAAAGAAGGCTTCTCTGCAGGACCTC
GAGTCGATAGTGTCGGCTATCGGCCGTGAGAAGATGGTGCCTGTGGTTGGCAGCAACAAG
AGTCGACCGGGCAAGAAGTCCATGATGGGCTTCATTTCCAAGGGCGAGGTGGAAAACCTG
TTGCAGGACCGAGTGGGACAGATGGACTACGATATCAACCAGGGCAGATGGGTTCGACGA
GGAGAAGATGATACCAGTGACGATCGAATCATGCCGCTGAGAAACGTGGACGAGGAGGAT
GAAGACACGTCTCATGGACATGCGGAGGATGCAGCCGACGACTCAGAGTCAGAAGACCCC
TTTGCTGGTATTGATGATCTTTCTGTGTCCGAAGAGATTCCCCCGTTCAACCCTAACGAC
AACAATCCACCGGAAGATGTCCTCGCCAAGTTCGCTGAATCAACTCGTGATCGACCCAAC
GCCAACGCCAACGTCAGAGTCGCCTCTTCCGTGGTCCAGTCAGAAACAAACCCCGAGGGC
TTGATACAATTTGGCCACACCACCACTGTGCCTCCGCGCTACGAGCCTGCGTCTAACCAG
ACGGTCAAGAGCGCCAAGGAGGGTCGTGCCGAGACTGCAGCTGCCATGCGAGCCTACGAG
CAGCAGCAAAAGGAGGACCGGTCAATTCTGGAAATGGCCCAAACCCAAACGGGACGTTCT
CCCCAGCGAATCGCCTCCAAGGCCAGAGAAGTCGCCCATTCGCCTCGTCACACAAACACA
AAGAAACTCAGACACCAGTCTCCTGTTCACAGCGATTTAACAGAGGATAGTGAGCCGTCT
CCTTCCTCTTCGGTGCTTTACCATGGCAGAGAAGAGGAGCACTTTGAGGAGCACTTTGAG
GAGCACTTTGGAGGTATTGATGGAGGCCTCAAAGAAGTACAACAAGAAGGGGGTTTCAAT
ATCTTTGATGTGGACGCCGATATGGACAACTCTGGCCTTGGAGCTGCTGGAGAAGACTCT
CAGCAGTACAACTCCCACATTTCCATTTCCAAACAGGCTGCTTTCCAATCCTTCCTTCGA
AGAGAGGGCCCCAGCATGTACGGTAAGCTGGACGACTTTGATCAGACCAGTCTTAGCAGT
ATCAGCCACAGCATGCAGACGTCTACTCCAGACATGAACTTCAGCAAGGTGTCCCACTTG
TATCCCAAGTCTACTCTCAACAGTCTTCGAAGGGGTATTGCTTCTACTCCTGGTGTTCTT
ACTCCTCAGTCTGTGGGTCGTGTTCCGGGCAAACCCATAAGTATGAAGTCTACCAAGAGT
CAGGGTCGGGATAAGGGCAAGGAGAAGGAGGACGAGAAAAGTACGGTTTCTGTGCGGCCT
ATTTCTGCTTTCTCGTCCGATTCCAGTTCTGGTGCAGAAGTGACTGTGGTTCGTGAGGCT
GCTGAGATAAGTGGCGATATGCCTGTTGTTCTTCTAAACAGAGAGAATAGCAACTCGACG
TTCCCATCTGCGGACAACTCCATCATTGGTGACTTCCACTTACCCTCTGAGGGACAGCAC
AACTCCGTGTACATGGACCAGAGTAAGGCGTCATTCAAGCTTGGCGACGTGGCTGCCAAG
AGAGGCATCAATCAGCAGCATGAGCGCGAACTGGAGGGTCACCATGGCCCCGGCAACTCT
GTAGCAACCCAGGCACTCGTCAAGTCGCTTCAGGAGCTCAATCCCCGAGAACAGGCGTGG
CACAAGGTGCGTCATCTGGACATCAAGGGCCGTGGCCTGGTGTCTCTGCAGGATCTGAAT
CGAATCTGTAGAAGTTTGACTGACCTTCGAGCTGCCGAAAACAAGCTCACTAACCTGGCT
GGTATTTCCACCCAGTTAAGAGTACTCAAGCTGTCTCACAATCTGCTGGAAAAGACAGTC
AGCTTCCTGGACTTCAAGAACTTACAAGAACTTGATCTCTCACATAATCCGTCCATTGGC
AGCCTGTCTTCGCTGCGTCATCTCAACAGTCTGAGAGTTCTCAACGTCGACAATTGTGGT
CTGGACTCGCTGGAGCCTCTCAGCAAGCTAGAGGGCCTTATGCACCTCTCTGCGAACCAC
AATCATCTGGCAAATACCCTCAATCTGGATGAGTACAGATGGCCGTCGATGGAGCAGCTA
TATCTGAACCACAATGAGCTGGTGGCAGTGTATGGAGTTGAGACTCTACACAATCTGCTC
ATTCTGGGGCTCAACAGCAACTATCTGACTCGGTTCAAGCCCGGAGCTCCTCTGGCTACT
GTCAACGGCATTGCTGTGGGCATTTCCAAACTGTCTCTGGCAGACAATGTTCAAAGACCG
CGTCTTCGACGCCTCATGGTGTCTGGGAACAAGCTGGTTGACCTGGACATCTCTCTCTGT
TACCGCCTCATGGTCTGTAAGGCCGAGCACAACCAGCTGGAGCTTGTCAAGGGCATTGAG
GAGTGTCCTGAGCTGATTACTCTGTCCATGGGTGCCCAGAGGGTGCCCATTGGCAATCTC
GATTCTGCCAATGACGTTCGAGACTTGCTTCTTGTGGGCACTAGGATTCTGGACTTCCCC
CTGTGCACCCCATTCATGAACCTCAACCGTCTGGATCTCAGCAACTGCGGTCTCAAGAGT
CTACCTGCCAACTTTGCCTACTTGTGCATGAACGTGCGGGTTCTCAATCTCAATTTCAAC
CAGATTGAAGACCTTACTCCTCTCATGGTCATTCCCAAGCTGACTCATTTGTTTTTGGTG
GGAAATCGAATTCCCAGAGACAGTTCTTCTCTGCGAAAACTGATATCCGAGCTGGGCTTT
CTGCGGGCTCTGGACACGAGAAACAACCCCGAGACGGAGGAGTTCTATCCGGATCTCATG
TCTGTTATGGGCACTCAGGCCGTGAACGGCAAGAGCATCTCGATCCAGTACACCAACACT
CAGACGGCCGAGTTTGAGCGGGCATGGCAGGGTACAGACACCAAGTTTGTGCGCAACCTC
AAGGCACACAATCGAGAGACGTACGAGGACAGAATCCTGTACCAGACTCAGGCCATGCTT
CGAGTGCATAACAAGGGCGGTCTGCTGTATTGGATGGACGGTGTGTTGCTTGGTAAGGAC
CCCAAGTACATTGAGTCGTACAAGAAGCACGCTGCCAAGTGCTGGGCTGCTCGGGAGAAG
CGACGCAAGCAGCAAGATGCTGAGGAGAGAGTTGCAGGGCTGTCGAAGGATGTTAACGAT
ACCGCTATGGCTAGTGGAGAAGAGGCTTATGGATTCATTTAATGCTATATTTATTGTATT
TTTACCCAAACGAATGAGAGAGCTGAGCTCGAAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06028g_CDS-001

Protein length: 1642 aa.
Product: Conserved hypothetical protein

>YALI0F06028g_CDS-001 MSDDDAGLVEMPNSSMMRQYDDEFRYDSGHNDTVSTAPPLFDHKSAGGTVNTRRASDSEP
EFSHLTTSTVGTTGTVSKGMAQIGKGLHIAKVQNNRVNGEAFDRTQPGEPQAQAAGGYAD
HDNEADNEAEASHVGGGLESAPWLEELQDEWPEISNDGWENEDSSHERAEHERVSSVKSS
GSVLASTTKQSSSVKASTPAWKQMLNEESKRESNRTLQRIFLPPTLGKRVDLGVIAEHTE
TEDTNTQGGSSPTEEQYSDAASVTDQMAQLSLTRTPELGPRDSPSRSKSASPLKLFSKHD
TYTHSRFEGLLPQLEGDSSSSGVDQSSFDSNRFASDQSYNQQQKMGARQNQPSESQDYLN
NADDLFNRIKQANFAQFEPNESEYDESSDWDSHRDSMNRSLNDNYGQHSRDSRDSRDSRD
GHNFQSSASGIEGGNAEGHVRAYFNSVKQRHEVGNDSLGGNNIKAFDFGKTNDTHNAQNA
RNVGAEFGSQPPGPSDTSNVMGSSPPDLKSEQPLSLPKTRQLQTLSSQPSQNTFSSGFSL
SSDKMASVHTTATTRKLGLKKKASLQDLESIVSAIGREKMVPVVGSNKSRPGKKSMMGFI
SKGEVENLLQDRVGQMDYDINQGRWVRRGEDDTSDDRIMPLRNVDEEDEDTSHGHAEDAA
DDSESEDPFAGIDDLSVSEEIPPFNPNDNNPPEDVLAKFAESTRDRPNANANVRVASSVV
QSETNPEGLIQFGHTTTVPPRYEPASNQTVKSAKEGRAETAAAMRAYEQQQKEDRSILEM
AQTQTGRSPQRIASKAREVAHSPRHTNTKKLRHQSPVHSDLTEDSEPSPSSSVLYHGREE
EHFEEHFEEHFGGIDGGLKEVQQEGGFNIFDVDADMDNSGLGAAGEDSQQYNSHISISKQ
AAFQSFLRREGPSMYGKLDDFDQTSLSSISHSMQTSTPDMNFSKVSHLYPKSTLNSLRRG
IASTPGVLTPQSVGRVPGKPISMKSTKSQGRDKGKEKEDEKSTVSVRPISAFSSDSSSGA
EVTVVREAAEISGDMPVVLLNRENSNSTFPSADNSIIGDFHLPSEGQHNSVYMDQSKASF
KLGDVAAKRGINQQHERELEGHHGPGNSVATQALVKSLQELNPREQAWHKVRHLDIKGRG
LVSLQDLNRICRSLTDLRAAENKLTNLAGISTQLRVLKLSHNLLEKTVSFLDFKNLQELD
LSHNPSIGSLSSLRHLNSLRVLNVDNCGLDSLEPLSKLEGLMHLSANHNHLANTLNLDEY
RWPSMEQLYLNHNELVAVYGVETLHNLLILGLNSNYLTRFKPGAPLATVNGIAVGISKLS
LADNVQRPRLRRLMVSGNKLVDLDISLCYRLMVCKAEHNQLELVKGIEECPELITLSMGA
QRVPIGNLDSANDVRDLLLVGTRILDFPLCTPFMNLNRLDLSNCGLKSLPANFAYLCMNV
RVLNLNFNQIEDLTPLMVIPKLTHLFLVGNRIPRDSSSLRKLISELGFLRALDTRNNPET
EEFYPDLMSVMGTQAVNGKSISIQYTNTQTAEFERAWQGTDTKFVRNLKAHNRETYEDRI
LYQTQAMLRVHNKGGLLYWMDGVLLGKDPKYIESYKKHAAKCWAAREKRRKQQDAEERVA
GLSKDVNDTAMASGEEAYGFI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG