YALI0F05984g

Overview

Description similar to uniprot|P53322 Saccharomyces cerevisiae YGR260W TNA1 High affinity nicotinic acid plasma membrane permease, responsible for uptake of low levels of nicotinic acid
Locus type CDS
Locus tag YALI0F05984g

Location

Species Yarrowia lipolytica Positions 888509..890001
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1493 (nuc.)
Previous locus YALI0F05962g Next locus YALI0F06006g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05984g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05984gYALI0F05984g_mRNA-001YALI0F05984g_CDS-001

Nucleotide sequence

 

>YALI0F05984g
ATGAGCGATGCCGAGATCCAGAGCCAGATCAACGGGCTCGCGGAAAAGTACGGCGTCAAC
CAACGCCGGCTCATGATGAAGGTCGATCTGTGTGTGATTCCTACCATCTGTCTGCTCTAC
ATCCTGGCCTTCCTCGACCGAGTCAACATCTCCAACGCCAACGTCTACGGCATGAGTGCA
GATTTGGGTCTTAAGGGCAACCACTTCAATGTCGCTCTTGCTATTTTCTTTGTTCCCTAC
GTGGTTGCCGAAATACCCAGTAACTGGCTCATGAAGAAAACCAGCCCTCACGTGTGGCTG
CCAGGATGCATGGTGCTGTTTGGTTGCACTCTTCTAGGCCAAGGATTTGTCAAAAACTAC
GGCCAGATTCTCGCCACCCGTTTTCTGCTCGGTCTCTTCGAGGCAGGAATGTTCCCCGGA
TGCTTCTATCTCATTTCCATGTGGTACCGCCGAGAAGAATCGCAGAAACGATACTCCTTC
TTTTTCTCCTCCACCTGTCTGGCCGGAGCGTTTGGAGGTCTTATTGCAGCCGGTATTCAC
AACCTTGATGGCCATCGAGGCATCGAAGCTTGGAGATGGATCTTCATCATTGAGGGAGCC
TGCACCGCCTTCATCGCCATGCTCATGTACTTCGTCATTTCCGACTTCCCGGAGGACGCC
AAGTTTTTGTCTGAGAACGAGCGACAGTTCATGAAGGAAAAGCTGGCTGTTGGCACCGTG
GGAGGCTCCGAATACGACCGAGGTATGTCCCTCAAGGACCTCAAGTTTGTCTTCACCGAC
TGGAAGATCTGGATGTCGGGAATGATGTACTTTGGTCTGGTGGTGCCCGCCTACGGATAC
GCCTACTTTGGAACCGCCATCGTCAAGACTCTAGGCTACTCGGAGATCAAGACACAGTTC
TACTCTGTGCCCCCCTGGGTCGCGGCATTTGGACTGTCCATGGGAGCCGCCATTTTCTCT
GATCGGTTCAGACACAGATTCTGGTTTGTCATTGGATCTTGTATCGTCTGTGTGGCCGGC
TTTGGTCTCATTATGGGAGAACACCACAAGATTGGAACCCGATACGGAGCCCTGTTCATG
ATCTGCGCAGGAGCATACACTTGCATGCCCATGCTTGTGTGCTGGACCCAAATGAACTTT
TCAGGACATCACCGACGAGCCATTGCTTCGGGATGGCAGATTGGATTCGGAAACATTGCT
GGTTTCATCTCCACCTTTGTCTTCAAGACTGAAGACGCTCCTTTCTACATGACCGGTCTC
GGGTGCTGTATTGCCTTTACTGCTCTGTCCGGAATCCTCTCTGTTGTCTACTACTTTGGT
CTGAGAGCTGCCAACAAGAAGAAGCAGAGCCCCGACTACGCTGTGGAATTCTCACAGTGG
CCTGAGGATAAACAGAGAATGGCCGGAGAGCTTCATCCAAGCATTTTCTACACTTACTAA
AAGTCGAAGATAGATCGATCGACATGCATAATTAATTTATTTGTACCTTACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05984g_CDS-001

Protein length: 480 aa.
Product: High-affinity nicotinic acid plasma membrane permease, putative

>YALI0F05984g_CDS-001 MSDAEIQSQINGLAEKYGVNQRRLMMKVDLCVIPTICLLYILAFLDRVNISNANVYGMSA
DLGLKGNHFNVALAIFFVPYVVAEIPSNWLMKKTSPHVWLPGCMVLFGCTLLGQGFVKNY
GQILATRFLLGLFEAGMFPGCFYLISMWYRREESQKRYSFFFSSTCLAGAFGGLIAAGIH
NLDGHRGIEAWRWIFIIEGACTAFIAMLMYFVISDFPEDAKFLSENERQFMKEKLAVGTV
GGSEYDRGMSLKDLKFVFTDWKIWMSGMMYFGLVVPAYGYAYFGTAIVKTLGYSEIKTQF
YSVPPWVAAFGLSMGAAIFSDRFRHRFWFVIGSCIVCVAGFGLIMGEHHKIGTRYGALFM
ICAGAYTCMPMLVCWTQMNFSGHHRRAIASGWQIGFGNIAGFISTFVFKTEDAPFYMTGL
GCCIAFTALSGILSVVYYFGLRAANKKKQSPDYAVEFSQWPEDKQRMAGELHPSIFYTY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG