YALI0F04928g

Overview

Description some similarities with uniprot|Q6CF25 Yarrowia lipolytica YALI0B10890g
Locus type CDS
Locus tag YALI0F04928g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 755727..756644
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 918 (nuc.)
Previous locus YALI0F04906g Next locus YALI0F04972g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04928g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04928gYALI0F04928g_mRNA-001YALI0F04928g_CDS-001

Nucleotide sequence

 

>YALI0F04928g
TGGTGGAACGTGAACTTCTAAGACCGCAAATCGGCTATCAAGAACGACAAGGCGGCCACA
CTAGCACGGAGAAAGATTTCGGCTACTAAGCTGGCCTACAGAGAATGACTTCGACTACCG
AACTGGCCTAGCCAACGGACTTGTAACCCTCACCGAGCTACGAAGTGGATACTTCTTCGG
TGTTAACACCCCGCCCGACGTTCTACCTGATGATCATCCTGTCTACCAAGGACAGTTTGA
TGACTTTGGGCTTGGCCATCGTCTCTTGACACGTCGTCATCGCCAGGAATACATGAAAAG
TTGGGGTCAACACATCTCTCCTCTATTAGAGAAGCTGTTAGGATTCAAGACGAGAGCAGG
AAAACCATTGAGAGACACGAGAGGTGTCAAGCATGCCCAGAAACTGCTGTTCGCAAAAGG
GTCTATTAGAGAGAACATAGCCAGACGTGAGCAATCGGGAAGCAAGCATCACAATCGTCT
GTTGAAAGCCGCTCTCCTGCCAAATCTCATTGTTACAGTAAGGTAATCCAGAGTGAAGAA
TCTCGATACTACTGCGGTGCTTACTCTTCGGATGGTTCTCGGTATCTCACAAAAATCAAG
ACTCGGTAGTCACTTTGTATCATGTTGATACGGACGGCGTCGACTCATGTTACAGTATGT
ACCGTACAGTGTACATGGAAGGTCCGCACGGCTTGGATATACCGTCATTGATTCAGAAAC
TGGAAAATGCATGTACGTATCGAAGAAAGGGTTTGTCCGACGTGAATGAAGACACTTGGG
AAACAGGGTCCGGCAACGTGTTTTCTGGAGCGATTGACAATGGGAAGCTTGACCAGTTCG
ACGATCTACACGTTAACTCACATATGATGACACCCAGATGGTGTACACGTTCTGACAACC
GCAAAAGATGGAAGATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04928g_CDS-001

Protein length: 272 aa.
Product: Pseudogene, hypothetical protein conserved in the Yarrowia clade

>YALI0F04928g_CDS-001 WWNVNF*DRKSAIKNDKAATLARRKISATKLAYREFDYRTGLANGLVTLTELRSGYFFGV
NTPPDVLPDDHPVYQGQFDDFGLGHRLLTRRHRQEYMKSWGQHISPLLEKLLGFKTRAGK
PLRDTRGVKHAQKLLFAKGSIREHSQT*AIGKQASQSSVESRSPAKSHCYSKVIQSEESR
YYCGAYSSDGSRYLTGRSARLGYTVIDSETGKCMYVSKKGLSDVNEDTWETGSGNVFSGA
IDNGKLDQFDDLHVNSHPDGVHVLTTAKDGRS


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG