YALI0F04972g

Overview

Description weakly similar to uniprot|V2XBJ9 Moniliophthora roreri hypothetical protein Moror_855
Locus type CDS
Locus tag YALI0F04972g

Location

Species Yarrowia lipolytica Positions 757262..758052
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 791 (nuc.)
Previous locus YALI0F04928g Next locus YALI0F04994r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04972g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04972gYALI0F04972g_mRNA-001YALI0F04972g_CDS-001

Nucleotide sequence

 

>YALI0F04972g
ATGTTTTCGCTGCGGGAAAAAAGCAGAGACACGCTACCGCTCGAGTCGACGGCTGTGGAC
GCCGCGGCTTCGCTCATCTCAACCGTTCCCCAAGACTGGAGCTTTGTGAAGGAGTACAAC
TACCCAGGGGTTCCTCCGGTAAAAACATATCGTCGAGAAATCGCGGGCGAACCGTGGTTT
GTTCGTGTGAGCGAACACAAGGACCCCAATGACCGGCCCTACGATTTGTTTGAAAAATTC
CGCCAGGGTCTGCTTCTAAACCACACCTCCAATGAGGTCCAATATATCCCCATGTTGCAG
GGGTTTGAGCAAGTGGGCCACTGCCGAGAGTACGAGAACCTGGTTGTTCACTACAAGTTT
CCCATTGGATTGGCCAACCGCAAAATGGCCGTCTGGTTGCTTGCCACCAGTCTGCCCGAC
GAGTTTTACATCATCCAGTTTCCAGCTGACAATGTTGTGGAGGGGTTCAAGGCGGTATAC
ATGTCTGTGGAAAATGTGCGGCTGGAGGGAGACACGGTGAGATGGACCATGGCCCAGACG
TCGGACGCAAGGGGTTTTTTACCCAGATGGATTCAGAACCAGAGCATTGCTTCAGCTATT
GCTCAGGACGTGCAACACTTTGTTGATTGGGTGAAGGGGAAAGAGGAGGAGGAGTTGCTG
TTGGAGGGTTAACGGAGACTATACGAGTGAAGAGATTGAGATCGACATGGGTCAATTAAT
AGCCATAGCACATGCGACCAGAGTATACCATGTCGTAGTATGTACATGAATGACATTGTA
TTATATCGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04972g_CDS-001

Protein length: 224 aa.
Product: Conserved hypothetical protein

>YALI0F04972g_CDS-001 MFSLREKSRDTLPLESTAVDAAASLISTVPQDWSFVKEYNYPGVPPVKTYRREIAGEPWF
VRVSEHKDPNDRPYDLFEKFRQGLLLNHTSNEVQYIPMLQGFEQVGHCREYENLVVHYKF
PIGLANRKMAVWLLATSLPDEFYIIQFPADNVVEGFKAVYMSVENVRLEGDTVRWTMAQT
SDARGFLPRWIQNQSIASAIAQDVQHFVDWVKGKEEEELLLEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG