YALI0F04906g

Overview

Description some similarities with uniprot|Q6BNZ8 Debaryomyces hansenii DEHA2E17754p
Locus type CDS
Locus tag YALI0F04906g

Location

Species Yarrowia lipolytica Positions 750999..754334
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3336 (nuc.)
Previous locus YALI0F04884g Next locus YALI0F04928g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04906g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04906gYALI0F04906g_mRNA-001YALI0F04906g_CDS-001

Nucleotide sequence

 

>YALI0F04906g
ATGCAGTGTGAACCCAATCCGATATTTTTGTTATCTTCCTCCACACAACTCAGCTCTGGA
ATGGCATTTTCTGGCTGGCAGAACAGTCCCGGTGGGCATTCCGTCGGCGCCAAGCTGGTG
GCTCGTGCCCAGAACGAAAACGAACAGGTGGTGCCCGGCACGGTCTTTTTGTCGTACCAT
GGCGAGGGTCAGCCCTGGGGCCGGACCCTGTCTGACGCCAACGAGAAGATTAGCACCAAG
CGGTTGGACGACATTGATCGGATTTGCATTGAGATGATTCTCAACATTGAAAGGACACGT
GGCCCGATTGTTCCCAGCCTTCAGGAGTCTCCTACGAGCTGTTCCGTGGAACTGACTCGG
AAGGAGCTGGACCACATGATCGAGACTCCTGCTTTCGAGCTGGACCGTCCCACGGTCGAC
AGCGACTGGGGCGGCAAGTTCCCACGTGCGAGAGCGCTGGAAATTGAGGCACTGTTATAC
AATGAGTTCTTCAAGGAGAACCAACACAGTGTGACCTCTCCTGCACGCAGACGTCGTGAC
CAAAAGTACAGACAAAAGTACTACCAGCCGTTTGTGGACCCCGGCGTGGGCCCCAGGGAG
ACAGACAGGGAGTACAGAAAGTTTCTTGCCGCTCAGCAGAGGGATGCCGAGACCAGAGGC
AAGCCCGAGAGGGAAGAGGACAGCAAAGGAGAAGGACTGTTTTCCGACAAGTTTTATTCT
GCCAACGATATCGAGGAGGAGGCTCAGCGCGACAACGACACCGAAGATGCAGTTACTGGT
ACTATCTGGAGCGAAAACGAGAAGGAACACTTCTTCTCTCTTCTAGGACGAGTGGGGAGA
CACCGACTGGGCGAGATTGCCGACGCAATGGACTCCAAGTCACTTGCCGAGGTCGAGGAG
TACCACGATCTGCTGTTTACCGCGTCTGAGCACCAGAAGGAAATGTTCAATGTCCGAGTA
AATGCTGGGGAGGAGTTCATTCCGGAAAAAGACCGACCGGTTTCGTTCAAGGAGATCCCA
GCTGCTTGTGAAATGTCCGACAAGTGGATCGCTCTGGAGGAGTCGTTTGCTCACGGTATC
GCCAAGTGGGAAGATGAGCATATGGCTAAAGGGGAGGAGCCGTTTTGTTCGATGAGAGTT
GGGGACGAGACGAAAGAGAACGCGTCTGAGGACTTACTCAAAACCGAGGCGTTGGTGTCT
CTTGCTGCAGAAATCTTCTACCCCAATCCTGCCAATGGTATGGATATTCAAAGCAAGGAG
TACAACACTGACTTGCCTGTGTTTGAGGGTATTGAGGGAGATGCAATCAAGGAGTTGTTG
ATTAGAATCGTCGACAAGACCCGCGAATTATTCCGCAACTACATGGAAGTTGATAAAACT
ACGTATGCTCGAACAGACAGCACCATGTCTACCGGAAATATGCTGTTTGTTCAAGGGCTC
AGGTACAACAAATTGTCTCGTTTCTTCCGGAGCTACTGGGAGAGAAGTGGATCTGAGTAC
GTGGATGAGAGATCGGAGGTTCCGTTCCCGGAGTCACTTGTTACACCCGGAACAACTGAA
GAACAGCACAAGAAGATTTTCGGAGAAATCAAGGATGCCGCACTTCCAAAGCTGTACACA
AACACAGGTCTGCTTGCTGCGAGTGTGAAGAGCATGTCCAAGCTGGACAAGGTCAAATTT
TTGGACGTCAAGGAGCAGGAGAGGTTGAATGGTATGATTGAGGAGGAAAAAAAGTACAAG
CGTGAACTTGAGGAGGGAAATCTAGAGTGGGATTTCACCCCTGAAGCACCAAAGAAACCG
TACAAAACCCGTTCCGAAAGGAATCTATCCGAGATTCTCATGGAAAAGAGAGACCAAGTT
GATACCGATTACTTGTACCCCTTCAAGAGCGCCCATGTCCCCGTGTTTCTCGATATTATG
CACATGGAGGAGACCGGTATGCTTGAGAATTTGGATGAGCGCAATTCTAAGATTATGGAG
GCCGGTCTGACTCGCTTGCTTGCAGGTGCTGCTCCATACACATACCCCAGGATCACTACT
CAGGTTAACAAGCTCATGTATGAGCAGGACAAGAAGCTGGAGGAAAGATTCAAGGAGAAG
ATGCTGCGGTACAAATACGACGGCGAGGGGAAGGAGATCAATATGTGGAAGCAGGATCTG
CCTCATGTGAGGGAGGAGATGATAAGACGACCACAAGACGTCCTCTGGAAGGCTAGAGAT
GAATATGTTTACGGTCTCCCCTGGTATAACCCCGGTACGAGAGGTCCCGGAGGCGGTTTG
AACCAGCCAGAAAACTCTTACCCTCCTAGTGTTCCGTATCCTTCTTCTGATGATCCTGTC
CAGGATAGGACAAGATACATATATCCTGACGGATCCTTATACGACGAATATAGCCGACAG
GTATTCCAGTTTCGCCGCGCGCGCCCGTTCTTTGAGCTCACCCATTCTCCCTACATTGAG
ATTGGCAGGGGTATGCTGAGTGAGTGGATGGACCATGATGATATTGAGAAGGGAACTCGG
GACCATGTGATGGGCATGAGGCAATACTTCCACAACTTTACCGACACACCGCCAACTAAC
CCGTACTCTGTGTACTACGAGGAGGAGCGTCCGAAATATGAAACTGCAGAGGATGCGGAA
TATGAGATTGAAGATGAGAAAGATGCAGCCGCTGACCCCCCTCTTGCTGTGTTGGGGGTG
GTGGAGGAGAAGAAGGAGGAGGAGAAGAAGGAGGAGGATGAGGTGGTGGAACAGTCGCCG
CCGCCGAAACACTTGTCCTTGTATCTTTCGAAGCAGCAGCGACAAGATATGCAGGAACGG
ATGCGGCAGGAGTATCAGGATGTGGTGGATAAGCTGGCACAGAGTGGATACGAAAACGTG
GAGAGATTTGGCATATCGCCGTTCGATCTTAACCCCATTTATGGCCACTCTGGTTTGTTG
CTTCAATATGACACCCTGAACTTCCGATCCGACGATATTCCTGGTCGGTTCATGGTGCAG
CAGCGGGAATCATACAATCAAATGCATATCCGGCAGCCACAAGACAATGACTATGTGGAC
CCTAACGAATACACACCGGGCCGTGGTCTAAAACGCAAAGCTCGTAACCACGAGGAGGAC
ACAAGGCCGTCTAAGATGCCCAGGTTGGAAGGCAGCGAGGTGCGGAGGCTGGAGGAGATG
TCCATGACGAACAATGGATCGGAGGATCCTGTTTGCAGAGTTAGTTAGGAGGCGAGTAGT
CAGAGTACTCTGAAGTGCATACCATTATAGGTTCAGTACAGTACAGTACTTTTAATACAA
TAAATTATAGGTGCAGTTCCAGTACTGTGCACTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04906g_CDS-001

Protein length: 1076 aa.
Product: Conserved hypothetical protein

>YALI0F04906g_CDS-001 MQCEPNPIFLLSSSTQLSSGMAFSGWQNSPGGHSVGAKLVARAQNENEQVVPGTVFLSYH
GEGQPWGRTLSDANEKISTKRLDDIDRICIEMILNIERTRGPIVPSLQESPTSCSVELTR
KELDHMIETPAFELDRPTVDSDWGGKFPRARALEIEALLYNEFFKENQHSVTSPARRRRD
QKYRQKYYQPFVDPGVGPRETDREYRKFLAAQQRDAETRGKPEREEDSKGEGLFSDKFYS
ANDIEEEAQRDNDTEDAVTGTIWSENEKEHFFSLLGRVGRHRLGEIADAMDSKSLAEVEE
YHDLLFTASEHQKEMFNVRVNAGEEFIPEKDRPVSFKEIPAACEMSDKWIALEESFAHGI
AKWEDEHMAKGEEPFCSMRVGDETKENASEDLLKTEALVSLAAEIFYPNPANGMDIQSKE
YNTDLPVFEGIEGDAIKELLIRIVDKTRELFRNYMEVDKTTYARTDSTMSTGNMLFVQGL
RYNKLSRFFRSYWERSGSEYVDERSEVPFPESLVTPGTTEEQHKKIFGEIKDAALPKLYT
NTGLLAASVKSMSKLDKVKFLDVKEQERLNGMIEEEKKYKRELEEGNLEWDFTPEAPKKP
YKTRSERNLSEILMEKRDQVDTDYLYPFKSAHVPVFLDIMHMEETGMLENLDERNSKIME
AGLTRLLAGAAPYTYPRITTQVNKLMYEQDKKLEERFKEKMLRYKYDGEGKEINMWKQDL
PHVREEMIRRPQDVLWKARDEYVYGLPWYNPGTRGPGGGLNQPENSYPPSVPYPSSDDPV
QDRTRYIYPDGSLYDEYSRQVFQFRRARPFFELTHSPYIEIGRGMLSEWMDHDDIEKGTR
DHVMGMRQYFHNFTDTPPTNPYSVYYEEERPKYETAEDAEYEIEDEKDAAADPPLAVLGV
VEEKKEEEKKEEDEVVEQSPPPKHLSLYLSKQQRQDMQERMRQEYQDVVDKLAQSGYENV
ERFGISPFDLNPIYGHSGLLLQYDTLNFRSDDIPGRFMVQQRESYNQMHIRQPQDNDYVD
PNEYTPGRGLKRKARNHEEDTRPSKMPRLEGSEVRRLEEMSMTNNGSEDPVCRVS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG