YALI0F03949g

Overview

Description some similarities with uniprot|P42844 Saccharomyces cerevisiae YNL310c
Locus type CDS
Locus tag YALI0F03949g

Location

Species Yarrowia lipolytica Positions 593574..594325
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 752 (nuc.)
Previous locus YALI0F03927g Next locus YALI0F03971g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03949g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03949gYALI0F03949g_mRNA-001YALI0F03949g_CDS-001

Nucleotide sequence

 

>YALI0F03949g
ATGATTCGGAACGTTGCGCGAATGACTTTTTCCCGTGGATTTGGCCGCGGAATCCCCCGA
TGGGGCTTTGCTTCCGGCCCGGTGGCCCCCGTGACAGCCCAGATCCAGCCCATGGCCGCC
CGATTTCCTTTTTCCACCGCTTCTACCGTCTTCCACCAGCACGGCGACGGATGCGGATGC
CCGTCACACAAGGTGCCCACGGTCAACGAGACCGGAGCCAAGGACGCCCAGGACGCCAAG
GACGCGGAGCCCGCCGGCGAGGTGACGCCCATGTACCAGATTTCGTTCACGTGTAAGCGA
TGCGACACCCCCTCGAGCCACAAAATGTCGCACCAGGCGTACCACGGCGGTACGGTCCTG
GTCCAGTGTCCCGGATGCAAAAACCGGCACCTGATTGCGGACCATCTGAAGATATTTTCC
GACGAGCCCGTCACCATTGAGGATATCATGGCCAAGAATGGCGAGAAGGTGACCATCAAG
CAGCGCGAATTCCGCTTCAACCAGGACGGAGGGGATTTGGAGTGGGTCAAGGAGTGAACG
GGAGCACATGACGGTTTGTGAATGGCTGTGAGCTACACTATCTAGGATTGTGTGAATGGG
ATCTGATGCAGATGCGACTGGCGACTGGCGACTTGACTGATTGGTGCCATACAACACCAA
CTGTCTCTCAGTGCCATTTTGTCCGTGAAACTCTACACTCTCTCCCAATTGTATATAGAC
GATGTTAATTTATAGCCAGAAATGGCATTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03949g_CDS-001

Protein length: 179 aa.
Product: Conserved hypothetical protein

>YALI0F03949g_CDS-001 MIRNVARMTFSRGFGRGIPRWGFASGPVAPVTAQIQPMAARFPFSTASTVFHQHGDGCGC
PSHKVPTVNETGAKDAQDAKDAEPAGEVTPMYQISFTCKRCDTPSSHKMSHQAYHGGTVL
VQCPGCKNRHLIADHLKIFSDEPVTIEDIMAKNGEKVTIKQREFRFNQDGGDLEWVKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG