YALI0F03927g

Overview

Description weakly similar to uniprot|P43571 Saccharomyces cerevisiae YFL025c BST1 negative regulator of COPII vesicle formation
Locus type CDS
Locus tag YALI0F03927g

Location

Species Yarrowia lipolytica Positions 583723..587058
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3336 (nuc.)
Previous locus YALI0F03905g Next locus YALI0F03949g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03927g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03927gYALI0F03927g_mRNA-001YALI0F03927g_CDS-001

Nucleotide sequence

 

>YALI0F03927g
ATGCACATAGCTACGTTCCCAGCGCTGGCAATAACAGCGCTGGCCCTGGTGCTGTGGGCC
ACGGTGGCGACGCACTCGTCCAACACAAACTCGTGCCATATGAGCTACATGAAGCCCGAC
ATGATCGCCATGACGGGCTTCAACACGACCCAGACCCCGCTGGCACACAAGTACTCGCTG
CATCTGTACCGCGAGCTGGACGTGGATCTGAGCCGCGAGGTGGGTGGACGCCCGGTGCTG
TTTGTGCCCGGAAACGGAGGCAGCATGCGCCAGATCCGCAGCATAGCCGGCGAGGCCGCG
GTCCAGTACTGGCACGACCCGCGCCGAGCGGGCGCAGATGCAGACACTTGGGCAAATGGC
TCGACAGCCAGGCCGAAATCAGCATTACAAAAACTCAACACCTTTGCATTTGGAGATACC
GAGAGTGACACAGAGGGTGTCAGGGGACTGGGCGATGCGGTTACCGCACGGGACATGTCT
GGTGACGACAGGAGGGACGCCGTCGAACGACCACTGTCTAACGGCAAGCTTCCCAGCCAG
TGGCCCGACGACCTCCCGCTGGACTTCTTCACAGTCAACTTCCAAGAAGATCTCACGGCG
TTCGACGGAACCACCGTCATCGATCAGGCCGAGTACCTCAACCAGGCTATTGCATATATT
CTCTCTCTCTACTCCTCCCACCCTAACCCCCCCACATCGGTCATTGTCATTGGCCACAGC
ATGGGTGGCATTGTGGCCCGAACAATGGTCACTCTGGACTCCTACATCCACGGGTCCATC
AATACCATTCTCACGCTTGCCACTCCCCACGTGCTTCCCCCAGTCTCGTTCGACAAGGGC
ATCGTCGGTCTGTACCATAACGTCAACGAGTTCTGGAAAACCGAGACCGTTCCTGGCGGC
AAGCTCGAAGACACTCTTCTGGTGTCTGTCACCGGGGGCATTCGCGATCAGATGATTCCG
GCAGAGTATTCTTCGGTCGACACTTTCCTTCCACCGACCAACGGCTTTGCTGTCGCTACA
ACGTCCATCCCGGACGTCTGGATGAGCATCGACCATCAAGCCATGGTTTGGTGTCATCAG
CTGCGACGAGTCGTGGCTGAGACGTTGTTAGTGGTGGCCGGGGAGACCACCGAAAAGGTG
AGCACGAGGTTGGACACGTTTCAGGAGTATTTTCTTTCTGGAATGGAGAGAGTTGAGAAA
AAGGCACAGAACGCGTCTGAGTCATCTAAACTGACTCTCGACACTCTCGTCTCAATTAAC
ACCCCCCTCACCACCACTTCCAATATTATCATCAATGACCATTCGCCCAACCAGCTGGTC
AAGACAAAGAGCTACTTCAAGTTTCCCGTGCTCAAGGCATCCGAGATCAACGAGATGAGC
AGGTCATTTGCCATGCCCGTCGATAAGGGGAAATCGCTGTTGGTTAAAACCAACATGCCA
CTGGAAGATTTGCACATTCTCGTGTGTCGAACCAACACTGGAGACGTGGATACCAACGGG
TTCTCGTTTTTGAGATACGGGAGCAAGTCAAAGGGCGTGAGAGTTGGTACGGACACGCTT
GTGTGTGCCAATGTCGCTGGGGAAGCTGTTGCCATGCCTTCTTCCATCAAGTATGCCACC
GGCGCCAAGATTCCAGAGGAGGAGGAAACTGGGGAAGATAACGACATACCTGTCGATAGC
GCCATTTCGTCCACCTCTCTGTCTGAGTATATCCAATTAGACGCATCCTCCCTTTCTGGC
TTCCAGTACGTGGTGGTCATCGACAACACCATGTCCGAAACTATTTCGTCGGATTCATAT
CTGCTTGCTGAAATGGCTCTCCCTTCAGACATGGCCGTTGTCGCGGCTCCGACATGGTGG
GAGGTACTCAAGGTGGGCCGATTCACCATTGAGCTACCCGAGAAGCGGGCTTTGTTGACG
AAAATCTCGTTGCCCCACTTTTGGTCTTCTCTGGTCGCCTTTTCTATCCGGCTCTCCACC
TCGGACTCCTTTTCCATGGAATACCAGTGTGAGGCGAAAAAGAGCATGGGCTCCGAGCAC
GACGTTCTGTTTGCCCCGCTCCTTATGCAGTATTCCGCCCAGCTGCATGAAGCCAAGTTT
AGTACAAACTTGTGTGGTGGCTATGAGCAGGGAACACGTGTTGCTGTTCATGGTGGAGCT
CCATACATGCCTTTGGCAGAGGGAAGAGACGTCTCCGGCACGGAGCTGTATCTGTGGACC
GACTCGTCGTCGAGATCGTCTGAGTCGCTGTCGCTGACACTGGAGATTGACTTATGGGGC
TCGCTGGGCCGCTTTCTCGGATTCTACCGTGTAATGTTTGCCATTTTCCCCATGTTTGTC
TTTCTGTGTCTGCTCATGATCCAGCTGCGGGTATGGACCACGACAGAGCTCTTTGTATCC
CTCAGCGACGCGCTGGACGTGTTTGTGGACTTCCAGCTGCCGTGGATTCTGGCGGGATCG
TGCGCGATTCCGTTTGTTCCGCATGTTTTGGTGTCTCTTCTGTACCCGCAGATGAGTCAG
CCCGGGCAATTCTTCCTCGGGCTCAATGGCACGCACTTGTGGTTTCTGGGTCCCGTCAGC
CTGGTAATCGCTACTGGCATCGTTGTGGTTCTGCACTGGTTGCTTCAGATTCTTACTCTG
TGGGTTTGTCAGTGCTACTACATGCTAGGACTTGCTCCTATCGCCCCGGAGTCTCCCTTT
TCAGTGAGACGCATTGTCACCATCTCGTTTCTACTGTTGTTGGTATTCAAAATCGTGCCG
CATCAATTTGCGTTCATGGTAGCTGTTCTGGTGATGGCTATGGGTGCTGGCAAAGCGCGA
GTCGGACGTCTGATGCAGTCGGAAGACAAAGACAATAAGTCTGAGCCCTGTGTTGTCATC
GACCGCAATCTCATCAACTACACGCACTCGTTGTTGTTATTGTTGGTGCTCCTGCTGCCC
ATTAACGCCCCCACCCTCGTGGTGTGGCTGCACAACATGGCCAACAAGTGGCACACGCCT
CTGGAGTCTCATCACGAGGTTTCTGCCATTCTGCCTATTCTGCTGCTTGTCCTGACGGCG
TCCCGAGGCATCATGATCCGTCTTCCGCAGTCAAAGAGAGCGATCTACGCCACCTTTGCA
TTTCTGGCGTATTTCGCCCTCTTTGTGTTGTTTCACGGGGTTGTTCATTCGTATCGGTTG
CATTTGCTCACGAATGGGTTGTGTCTTTGCTTGTTGTACCTGAGCTTGTAGCTGGGTGCA
TGCTGAGGAGGACACTGTCTTTAACAGAAGCGTCTGCTGGTGCAGAGCTTCTTTTGTACT
ATATTATATCACTAATTTATCTACGATACAGAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03927g_CDS-001

Protein length: 1077 aa.
Product: Conserved hypothetical protein

>YALI0F03927g_CDS-001 MHIATFPALAITALALVLWATVATHSSNTNSCHMSYMKPDMIAMTGFNTTQTPLAHKYSL
HLYRELDVDLSREVGGRPVLFVPGNGGSMRQIRSIAGEAAVQYWHDPRRAGADADTWANG
STARPKSALQKLNTFAFGDTESDTEGVRGLGDAVTARDMSGDDRRDAVERPLSNGKLPSQ
WPDDLPLDFFTVNFQEDLTAFDGTTVIDQAEYLNQAIAYILSLYSSHPNPPTSVIVIGHS
MGGIVARTMVTLDSYIHGSINTILTLATPHVLPPVSFDKGIVGLYHNVNEFWKTETVPGG
KLEDTLLVSVTGGIRDQMIPAEYSSVDTFLPPTNGFAVATTSIPDVWMSIDHQAMVWCHQ
LRRVVAETLLVVAGETTEKVSTRLDTFQEYFLSGMERVEKKAQNASESSKLTLDTLVSIN
TPLTTTSNIIINDHSPNQLVKTKSYFKFPVLKASEINEMSRSFAMPVDKGKSLLVKTNMP
LEDLHILVCRTNTGDVDTNGFSFLRYGSKSKGVRVGTDTLVCANVAGEAVAMPSSIKYAT
GAKIPEEEETGEDNDIPVDSAISSTSLSEYIQLDASSLSGFQYVVVIDNTMSETISSDSY
LLAEMALPSDMAVVAAPTWWEVLKVGRFTIELPEKRALLTKISLPHFWSSLVAFSIRLST
SDSFSMEYQCEAKKSMGSEHDVLFAPLLMQYSAQLHEAKFSTNLCGGYEQGTRVAVHGGA
PYMPLAEGRDVSGTELYLWTDSSSRSSESLSLTLEIDLWGSLGRFLGFYRVMFAIFPMFV
FLCLLMIQLRVWTTTELFVSLSDALDVFVDFQLPWILAGSCAIPFVPHVLVSLLYPQMSQ
PGQFFLGLNGTHLWFLGPVSLVIATGIVVVLHWLLQILTLWVCQCYYMLGLAPIAPESPF
SVRRIVTISFLLLLVFKIVPHQFAFMVAVLVMAMGAGKARVGRLMQSEDKDNKSEPCVVI
DRNLINYTHSLLLLLVLLLPINAPTLVVWLHNMANKWHTPLESHHEVSAILPILLLVLTA
SRGIMIRLPQSKRAIYATFAFLAYFALFVLFHGVVHSYRLHLLTNGLCLCLLYLSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG