YALI0F02475g

Overview

Description similar to uniprot|P25656 Saccharomyces cerevisiae YCR094W (ohnolog of YNR048W) CDC50 cell division cycle mutant
Locus type CDS
Locus tag YALI0F02475g

Location

Species Yarrowia lipolytica Positions 377820..379264
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1445 (nuc.)
Previous locus YALI0F02453g Next locus YALI0F02497g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02475g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02475gYALI0F02475g_mRNA-001YALI0F02475g_CDS-001

Nucleotide sequence

 

>YALI0F02475g
ATGGACTCGGACAGTGAAAACGAACGGCCCACGCATCAGGAGCCCAAGGAGAAGTCGCGA
CGACCCCCCAACACGGCCTTCCGGCAGCAGCGGCTCAAGGCATGGCAGCCCATCTTCACT
CCCAAGACGGTGCTGCCCCTGCTCCTGTGTATCACCGTCATTTTTGCGCCTCTTGGAGGA
GCGCTGATTTACGGCAGTGACCAGGTCCAGGAGATCATCATCGACTACAGCCACTGCCAT
GAACAGGCGTCGACCACAGAGCCTAGAACCATGGATGACAAGTACATCACCACACACTTC
AACGCCAAGGACGCCACCTCCAAGGTCCAGTGGCAGCTTCTGGACGGCACCGACGAGCAA
AAGTCGCGTCGTTCATACAACGGAACCTGCAGACTCACGTTTGATGTGCCCCATGATATG
GGTGCCCCCATTTACATGTACTACCGACTGACCAACTTCTACCAGAACCATCGACGATAT
GTGACGTCCTACAATGAGGACCAGCTGAACGGAAAGAACAAGAGTGCACATGATCTCAAA
GACAAGAACGATTGCAAACCCCTGGTTTTAGACCGGGATGGAAAGCCATACTACCCCTGT
GGACTGATCGCCAACTCCATGTTCAACGACACCTTCCATACTCCTGTGGCTCTTAACCCC
TCTGGAAACCAGGGTAACGTGACTTACGACATGACCACCGATGGGATTGCCTGGGGAACC
GACAAGAACCGATTCAAAAAGACTACATACAACGCCTCCCAGGTGACACCCCCTCCGTTC
TGGGTCGAGAAGTTCCCCGACGGATACACCGAGGAGAACCTGCCCAACATTGCTGAATGG
CAGGAGTTCCAGAACTGGATGCGAACTGCTGCCCTGCCCACCTTCTCAAAGCTCGTCATG
CGACAGGATCACAACACTCTGACAGTCGGAACCTACTCTGTGGATGTGGACTTGTACTTC
CCCGTTCTCCAGTATGACGGCACCAAGTCGCTTGTGCTGACCACACGAAGTGCCGTGGGA
GGCCGAAACCCCTTCCTGGGCATTGCTTATGTTGTCGTTGCCGGTATTTGTGCCGTCGTC
GGTCTGCTGTTCCTGGGTAAGCATCTGGTCAAGCCCCGAAGACTGGGTGACCATTCTTAC
CTGAGCTGGAACAACGAGAACTAAGGTATGGGGGATGAGATGACTTGGTGATCAGATTGG
TAATCAGAACAATATGATTTGTATCAAGTCGCGAATGATGAGGAATGAGACTCTGTTCAA
CAGCCAAGACTCAGGGGCTGAGTCAGAGGACTCGTACGAGTACCACCCACTCAGCAACAT
TGCCTGTATGGAGGACTGACTGACAAGTGCTACAAGTATGAGCTCGGAGACATCCTGCCG
ACGCGGACTTGCTCCCAACTCGAGATATATAATATGTAAATGGATATTTTTGATAGTGTG
ATGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02475g_CDS-001

Protein length: 388 aa.
Product: Endosomal protein that interacts with phospholipid flippase Drs2p, putative

>YALI0F02475g_CDS-001 MDSDSENERPTHQEPKEKSRRPPNTAFRQQRLKAWQPIFTPKTVLPLLLCITVIFAPLGG
ALIYGSDQVQEIIIDYSHCHEQASTTEPRTMDDKYITTHFNAKDATSKVQWQLLDGTDEQ
KSRRSYNGTCRLTFDVPHDMGAPIYMYYRLTNFYQNHRRYVTSYNEDQLNGKNKSAHDLK
DKNDCKPLVLDRDGKPYYPCGLIANSMFNDTFHTPVALNPSGNQGNVTYDMTTDGIAWGT
DKNRFKKTTYNASQVTPPPFWVEKFPDGYTEENLPNIAEWQEFQNWMRTAALPTFSKLVM
RQDHNTLTVGTYSVDVDLYFPVLQYDGTKSLVLTTRSAVGGRNPFLGIAYVVVAGICAVV
GLLFLGKHLVKPRRLGDHSYLSWNNEN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG