YALI0F02497g - PDH1

Overview

Description uniprot|Q6C354 Yarrowia lipolytica YALI0F02497g PDH1 2-methylcitrate dehydratase
Locus type CDS
Gene name PDH1
Locus tag YALI0F02497g

Location

Species Yarrowia lipolytica Positions 380394..382040
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1647 (nuc.)
Previous locus YALI0F02475g Next locus YALI0F02519g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02497g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02497gYALI0F02497g_mRNA-001YALI0F02497g_CDS-001

Nucleotide sequence

 

>YALI0F02497g
ATGCGAGCTTTCAGATCTGCCGCCAACTTCGGAGCTGCTTCTAACATCTACCGAAAGTCC
TTCACCCCCGCTTCTATTGCCTCTAACCGATTTGTCTCTGCCAGAATGAGCTCCATCATG
ACCGACAACGCCCGACCTAACACCGACAAGGTTGTTCAGGACATTGCCGACTACATCCAT
GACTACAAGATCGACTCCTCCGTCGCCATGGAGACTGCTCGACTCTGTTTCCTTGACACT
CTCGGCTGTGGTCTTGAGGGTCTCAAGTACCAGCAGTGTGCCAACATTGTTGGCCCCGTT
GTTCCCGGCACCATTGTGCCCAACGGAACCAAGGTCCCCGGTACCGACTACCAGGTTGAC
CCCGTCCGAGGTGCCTTCAACATTGGTACCATCATCCGATGGCTCGATTTCAACGACTGC
TGGCTCGCCGCCGAGTGGGGACACCCCTCCGATAACCTTGGCGGTATCCTTGCCGTTGCC
GACTGGCAGACTCGATCCGCCAAGGCCGGTCTTGAGGGCAAGGTCTTCAAGGTCAAGGAT
GTCCTCGAGGGCATGATCAAGGCCCACGAGATTCAGGGAGGTCTCGCCATCGAGAACTCT
TTCAACCGAGTCGGTCTCGACCACGTTGTTCTCGTTAAGATCGCCTCTACTGCCGTTGTC
TCCGGCATGCTCGGCCTCTCTCGAGAGCAGACCGCTGATGCCATCTCTCAGGCCTTTGTC
GACGGTCAGTCTCTCCGAACCTACCGACACGCCCCCAACACCATGTCTCGAAAGTCTTGG
GCTGCCGGTGATGCCACCTCTCGAGCCGTTAACCTGGCTCTGCTCGTCAAGAAGGGTGAG
GGAGGTATGCCCTCTATCCTGACCGCCAAGACCTGGGGTTTCTACGATGTCCTCTTTGGC
GGCAAGGAGTTCAAGTTCCAGCGACCTTACGGCTCCTACGTCATGGAGAACGTTCTCTTC
AAGATCTCTTTCCCCGCTGAGTTCCACGCCCAGACCGCCTGCGAGTCTGCCATGCTGCTC
CACGAGGAGCTCAAGAAGCTTGGCAAGACCTCCGATGACATTGCCTCCATCAAGATCCGA
ACCCAGGAGGCCGCCATGCGAATCATCGACAAGAAGGGTCCCCTGCACAACTACGCTGAC
CGAGACCACTGCATCCAGTACATGGTTGCTATTCCTCTCATCCACGGCCGACTTACCGCT
GACGACTACACTGACGAGATCGCCTCCGACCCCCGAATTGACGCCCTCCGAGAGAAGATG
GAGTGTGTTGAGGACAAGCGATTCTCCGAGGAGTACCACGCCCCCGACAAGCGATACATC
GGTAACGCCATCGAGATCACTCTCAAGGACGGCACCGTGCTCGACGAGATCGAGGTCAAC
TACCCCATTGGCCACCGACAGCGACGAGAGGAGGGTACCCCCGTTCTCCTTGAGAAGTTT
GCTCGACATCTCCGTGGACGATTCCCTGAGGGACAGGTTGAGAAGATTCTCGCTGCCTCT
AACCAGGATATTGTCAACATGGACATTGACGAGTACGTTGACCTTTACGTCAAGAAGGAC
TAATTTAGTCATGTGTTGAATTAGTTAATGATTATGAGTTGTTATTTAATGAGGTGCGAG
ACACTGTCGAGCATCAAGTGTACGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02497g_CDS-001

Protein length: 521 aa.
Product: 2-methylcitrate dehydratase
Gene: PDH1

>YALI0F02497g_CDS-001 MRAFRSAANFGAASNIYRKSFTPASIASNRFVSARMSSIMTDNARPNTDKVVQDIADYIH
DYKIDSSVAMETARLCFLDTLGCGLEGLKYQQCANIVGPVVPGTIVPNGTKVPGTDYQVD
PVRGAFNIGTIIRWLDFNDCWLAAEWGHPSDNLGGILAVADWQTRSAKAGLEGKVFKVKD
VLEGMIKAHEIQGGLAIENSFNRVGLDHVVLVKIASTAVVSGMLGLSREQTADAISQAFV
DGQSLRTYRHAPNTMSRKSWAAGDATSRAVNLALLVKKGEGGMPSILTAKTWGFYDVLFG
GKEFKFQRPYGSYVMENVLFKISFPAEFHAQTACESAMLLHEELKKLGKTSDDIASIKIR
TQEAAMRIIDKKGPLHNYADRDHCIQYMVAIPLIHGRLTADDYTDEIASDPRIDALREKM
ECVEDKRFSEEYHAPDKRYIGNAIEITLKDGTVLDEIEVNYPIGHRQRREEGTPVLLEKF
ARHLRGRFPEGQVEKILAASNQDIVNMDIDEYVDLYVKKD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG