YALI0F02453g

Overview

Description highly similar to uniprot|P12385 Saccharomyces cerevisiae YBR143c SUP45 translational release factor
Locus type CDS
Locus tag YALI0F02453g

Location

Species Yarrowia lipolytica Positions 375063..376536
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1474 (nuc.)
Previous locus YALI0F02431g Next locus YALI0F02475g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02453g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02453gYALI0F02453g_mRNA-001YALI0F02453g_CDS-001

Nucleotide sequence

 

>YALI0F02453g
ATGGCCAAGGAAGTGGAACCAAGCGACGCCGAGAAGAACATCGAGATCTGGAAGGTGCGA
AAGCTGATCAAGAACCTCGAGGCCGCTCGAGGTAACGGAACCTCCATGATCTCGCTCATC
ATGCCCCCCAAGACCCAGATTCCACAGTACTCCAAGATGTTGACCGATGAGTACGGAACC
GCCTCTAACATCAAGTCTCGAGTCAACCGACAGTCGGTGCTCTCCGCTATCACATCCACT
CAGCAGCGTCTCAAGCTGTACAACCGAGTGCCCACCAACGGTCTGGTTATCTACTGTGGA
GACGTGATTACTGCCGACGGCAAGGAGAAGAAGATGTCCATTGACTTCGAGCCCTTCAAG
CCCATCAACACCTCTCTTTACCTGTGTGACAACAAGTTCCATACCGAGGCTCTGTCAGAG
CTGCTGGAGTCCGACTCCAAGTTTGGCTTCATTGTCATGGACGGTAACGGAGCCCTGTTC
GGTACTCTGTCCGGAAACACCCGAGAGGTTCTGCACAAGTTCACCGTTGATCTGCCCAAG
AAGCATGGTCGTGGTGGTCAGTCCGCGCTGCGATTCTCCCGACTGCGAGAGGAAAAGCGA
CACAACTACGTGCGAAAGGTGGCCGAGGTGGCTGTCCAGAACTTCATCACAAACGACAAG
GTCAACGTCAACGGTCTGATTCTGGCCGGTTCTGCCGACTTCAAGACCGAGCTGAACGGC
TCTGATCTCTTTGACAACCGTCTGCACGCTAAGGTCATCAAGACTGTCGATGTGTCGTAC
GGAGGAGAGAACGGCTTCAACCAGGCCATCGAGCTGTCTGCCGAGACTCTGTCCAACGTC
AAGTTCGTTCAGGAGAAGAAGCTGCTGACCCAGTACTTCGACGAGATCTCCATGGACTCT
GGAAAGTTCTGTTACGGCTACGACGAGACTCTCAAGGCCCTGGATCTCGGAGCCTGCGAG
ACTGTCATTGTCTACGAGAACCTTGACATCCAGCGAATGACTCTCAAGAACAACGATGGC
GAGGAGACCATTGTGCACATCAAGAAGGGAACTCCCACCGAGGAATACCTGATCGACAAG
GAGGGTAACGAGCTGGAGGTGGTCGACGAGATTCCTCTGCTCGAGTGGCTAGCCGAGCAC
TACAAGGACTTTGGCGCCCAGCTGGAGTTTGTCACAGACCGGTCCTCCGAGGGTGCCCAG
TTCGTCCAGGGCTTTGGTGGTATCGGCGCTCTGCTCCGGTACAAGGTCAACTTTGAGCAG
CTCGTGGAGGAGTCTGACGACGAGTACTACGACGACTAAGAGACTAATGTGCATCACAAA
AATGTTACGTAACAAAATTATAGTGGAGAGAGACTGGATGAACGACGTGACTCTCCGATT
ATAGATTATGGATGGGTTATTATTAGGTGAAATAGTTGATAGTGCCTTGCCACAACACTG
GTAAATTAATACAACGGATGGTGACAATGACAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02453g_CDS-001

Protein length: 433 aa.
Product: Translational release factor, putative

>YALI0F02453g_CDS-001 MAKEVEPSDAEKNIEIWKVRKLIKNLEAARGNGTSMISLIMPPKTQIPQYSKMLTDEYGT
ASNIKSRVNRQSVLSAITSTQQRLKLYNRVPTNGLVIYCGDVITADGKEKKMSIDFEPFK
PINTSLYLCDNKFHTEALSELLESDSKFGFIVMDGNGALFGTLSGNTREVLHKFTVDLPK
KHGRGGQSALRFSRLREEKRHNYVRKVAEVAVQNFITNDKVNVNGLILAGSADFKTELNG
SDLFDNRLHAKVIKTVDVSYGGENGFNQAIELSAETLSNVKFVQEKKLLTQYFDEISMDS
GKFCYGYDETLKALDLGACETVIVYENLDIQRMTLKNNDGEETIVHIKKGTPTEEYLIDK
EGNELEVVDEIPLLEWLAEHYKDFGAQLEFVTDRSSEGAQFVQGFGGIGALLRYKVNFEQ
LVEESDDEYYDD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG