YALI0E32527g

Overview

Description weakly similar to uniprot|Q7RZX4 Neurospora crassa NCU00237.1 hypothetical protein
Locus type CDS
Locus tag YALI0E32527g

Location

Species Yarrowia lipolytica Positions 3861957..3863784
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1828 (nuc.)
Previous locus YALI0E32505g Next locus YALI0E32542g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32527g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32527gYALI0E32527g_mRNA-001YALI0E32527g_CDS-001

Nucleotide sequence

 

>YALI0E32527g
ATGACGTTCCAGGTGGTAGTGCTGGTGAGTACACGACCGAGGGAATTGCCTTTTGGACAC
GCACGAAACATACGTCCAGCGACTAACCCAGGGATCCTCAGGAGGACCGATAGATAGAGG
CACCTGCTCTTATCTGGTGCGTGGCAGCGATGAGGAACGCAATGCAACGACGACATCGAC
AAAAGCCGATGATGCAACAGGAACTTACATTGCAGTCGACGCGGGCTGCTTTCTGTCGGG
AATCATCAACGTGCTCGAAAAACAGCAACTGCTAACTCCCCGAGAATACCAACAGGAACT
GCTGGCCGAGTCCATTGCGCCGCAGCCTCCTCACTCACAACGCTCCTGGAACATCGCGTA
CCCCCCATTCGACGCTCAGAGCCTTCCCTACGGCGGACCCACAGCAAATGCGGCCCACAT
ATTGTCCCTGGTCTCGACAATATGCATCACTCATCCTCACCTCGACCACATCTCGGGCGT
GATCATGAACTCGGCTGCCTTTTCTCCACAACAAACAAAACGGTTGGCAGGCTTGCCACG
GGTCATTCAGGCCCTCAAAGATCACGTGTTTAACGGTGTGATCTGGCCAAACCTCACCAA
TGAAGGAGTTGACGCTGTACATCTGGTTCAACTTCTGCGCTTGTCAGAACACCTAAGCTC
TCCAAATTTGGCCCAGGGGCTCACAGTGACGCCCTATGCAGTCTCCCATGGCCACATTCT
GCGTCCAGCGCACCAGACACATACTTCTTCAGGTCACCACCAGCCGTTCAAACCGTCCTT
TAGCATTCGATCCTCGGAACCCTCTGAACCCCACAGAGGCTCTCGTAGAATGCCCTCCAG
TGTCATTCCACCAGACTCCGTCATCGAAATGCGCCGTCAGAGCTTGATGATGGAAAAACG
CCAACTTCGGGCGTCAATCGCCTCTGCCTCTTCGCATCTCCACTCCCCCACATCTCCCTC
GTTGGTTCCTCATCGCAAATCTAGCGGTGGTACGTCTTCGGCAAGCTCAGTCGGCTCGGT
AAGCCCCTCCAGCTACCCTACATCCAATCCAACCTCGCATCCAACCCCAGGACCTCCTCT
GGGAACGTCTCTGGCATCTTACGACTCAACAGCCTTCTTCATCCACGACAGCAACACAAA
CAGGGTGCTGCTCATGTGGGGCGACGTGGAACCAGATTCCATCTCGTACACGCCGCGGAA
CTACCTCGTGTGGCGAAAGGCAGCTGAATACATGCAGCAGGGGCTGCTGGCGGGCATATT
TATCGAGTGCTCGTTTGCCAACCCACACGACGACGCTCTTCTCTTTGGTCACTTTTCCCC
CCGCCACCTGATTGCCGAACTTAAGTACTTTGCATCAATGGTGGAGGGCAGTGAAGAGGA
CTTCCATGCTATGGTGGGATGGGAAGAACTTCATGAGACCAACGAGTTGGACGTGGAAAA
CATGGACGAGGAGGTGTCGATTCCGGTCCCCAAACGCATCCCTCAGACACACGCACATCA
TCCACACCAACCGCCTCCAGATCTGCACTTGAAGGGTCTTCCTGTTGTTATCACGCACGT
AAAGGAGGATATTTACAATGAGGATCCCGAAAACGATCCTCGGAAAGTGGTTTTGGAGGA
TATAATCGGCCTGGCCAAGATTGAGAGCATTGGCTGCGACTTCATAATCGCCACTCCCGG
GCTGAGTTTGCAGTTGTAGTGACATAACAGGATTACCATTGACATAAAGGAACTTTTTTC
TCTCTCGTCTCTCTCAACGCTTCAAACAGCTTCATAATATCTACTAATAGTGGTTATACC
AAGTAATCTATTCCAACAAACACAGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32527g_CDS-001

Protein length: 544 aa.
Product: Conserved hypothetical protein

>YALI0E32527g_CDS-001 MTFQVVVLGSSGGPIDRGTCSYLVRGSDEERNATTTSTKADDATGTYIAVDAGCFLSGII
NVLEKQQLLTPREYQQELLAESIAPQPPHSQRSWNIAYPPFDAQSLPYGGPTANAAHILS
LVSTICITHPHLDHISGVIMNSAAFSPQQTKRLAGLPRVIQALKDHVFNGVIWPNLTNEG
VDAVHLVQLLRLSEHLSSPNLAQGLTVTPYAVSHGHILRPAHQTHTSSGHHQPFKPSFSI
RSSEPSEPHRGSRRMPSSVIPPDSVIEMRRQSLMMEKRQLRASIASASSHLHSPTSPSLV
PHRKSSGGTSSASSVGSVSPSSYPTSNPTSHPTPGPPLGTSLASYDSTAFFIHDSNTNRV
LLMWGDVEPDSISYTPRNYLVWRKAAEYMQQGLLAGIFIECSFANPHDDALLFGHFSPRH
LIAELKYFASMVEGSEEDFHAMVGWEELHETNELDVENMDEEVSIPVPKRIPQTHAHHPH
QPPPDLHLKGLPVVITHVKEDIYNEDPENDPRKVVLEDIIGLAKIESIGCDFIIATPGLS
LQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG