YALI0E32505g

Overview

Description similar to uniprot|P30657 Saccharomyces cerevisiae YFR050c PRE4 Proteasome component
Locus type CDS
Locus tag YALI0E32505g

Location

Species Yarrowia lipolytica Positions 3858444..3859293
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 850 (nuc.)
Previous locus YALI0E32494g Next locus YALI0E32527g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32505g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32505gYALI0E32505g_mRNA-001YALI0E32505g_CDS-001

Nucleotide sequence

 

>YALI0E32505g
ATGGAGCAATCACCAATCAATTGGGGCCGTCCAAGAGACGACATTTACGGCCACTACTCG
GATGCCATCTCGCAGGCCCCCAACACTCACTCGCTGCCCAAGAAACACACACAGCAGCCC
ACAGTTACCGGTTCTTCTGTGATTGGAATCAAGTTCGATAAAGGCGTGATTGTGGCTGCT
GACACCCTGGCCTCCTACGGTTCGCTGGCTCGGTTCGACAACATGGATCGATTGACCCAG
GTCGGCGATTCCACCATTGTTGGCATTGGAGGCGACGTTTCAGACATGCAGTACGTCCAG
AGACTGCTGGAGGAGCTAGAGATCGAGGAGAACTACGACAACAGCGGCGACCAGTCGCTG
CACTCGGAAAACATCTTCAACTACTTGTCCAAGGTCTACTACAACCGAAGATCAAAGATG
GATCCTCTGTGGAACGCCGTCCTTGTGGGCGGTGTTGACAGCAAGGACGAGCCCTTTCTG
AGCCACGTCGACCTGCTCGGCGTCACCTTCAGCTCTCCCGCTCTGGCAACGGGCTTTGGT
GCCTACTTGGCCCTGCCTCTGCTGCGACAGCTGGTGCCTTACCCCGACTCATACAAGAAC
GTGACGGAGGCTGACGCTCGAGCCATGGTGGAGAAGTGCATGAAGGTTCTCTTTTACCGA
GATGCCCGGTCCATCGACAAGTACGACGTGGCCACTATAACCAAGGGCAATGTCAAGATC
GAGAAGGATATCAAATGCAAGGATCAGAACTGGCGGTTTGCTGAGGACATCAGAGGATAC
GGTCGAACCACCTCTTAGGGATATAGGTAATGATTGCAGAACGAGACGAGTCGGGGTAGA
TGCCGTTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32505g_CDS-001

Protein length: 266 aa.
Product: Beta 7 subunit of the 20S proteasome, putative

>YALI0E32505g_CDS-001 MEQSPINWGRPRDDIYGHYSDAISQAPNTHSLPKKHTQQPTVTGSSVIGIKFDKGVIVAA
DTLASYGSLARFDNMDRLTQVGDSTIVGIGGDVSDMQYVQRLLEELEIEENYDNSGDQSL
HSENIFNYLSKVYYNRRSKMDPLWNAVLVGGVDSKDEPFLSHVDLLGVTFSSPALATGFG
AYLALPLLRQLVPYPDSYKNVTEADARAMVEKCMKVLFYRDARSIDKYDVATITKGNVKI
EKDIKCKDQNWRFAEDIRGYGRTTS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG