YALI0E31108g

Overview

Description weakly similar to uniprot|Q8TFK5 Yarrowia lipolytica YALI0E18788g CWP1 Cell wall protein of the PIR family
Locus type CDS
Locus tag YALI0E31108g

Location

Species Yarrowia lipolytica Positions 3666949..3667695
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 747 (nuc.)
Previous locus YALI0E31086g Next locus YALI0E31130g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31108g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31108gYALI0E31108g_mRNA-001YALI0E31108g_CDS-001

Nucleotide sequence

 

>YALI0E31108g
ATGCACTTCTCCGCCGTCCTCCTCGCCGCCACCGCCGGCCTTGTCTCCGCTCAGAAGTTT
GGACTTATCGCCATCCACTCTGGATCCGATGTCCAGAACTCTGCCATCAACTCCAACGGT
AACCAGCTCGTTATTGGAGGAGGTGAGCCCACCACCTACGAGGTGAAGGACCGTGGCCTC
TACGCCAACGGTAAGCCCGTTGAGTTTGGCCAGTACGCTTTCATTGAGGAGACAGACGGC
CAGGCCACCCGAGATATCATTGTGAACGGTCAGGACCACCTCTACGTTCCCCGATTCGAC
TTTGTTGCCTGCCCCGACGGAAAGAACGGCTACGTTCTTGCAAACCAGGATGCTTGCGCT
AACGGTGCCATTGGAATCGTAGCCCGAGCCGTCTACTCCGATGGTGAGTCTGCTGCTGCC
AACTCCAGCCCCGCAGCCGAGGCCACTAAGTCCGCTGTTGTCACTTCCAAGTCTACTGTC
CAGGTCACCATCACCTCTTGTGCTGATGACAAGTGCCACAAGGAGACCGCCGCTGCTGCT
TCTCCCGCACCTGCCCCCGCCAAGACCACTCCCGGTGCTATTGTCTCTCAGATCGGTGAT
GGCCAGATCCAGGCTCCTCCCTCCACTCAGCCCGCCCAGGCCAACGGTGCCGCTGCTATG
GGTGTCTCCGCTGTCGCTGGTGTCGTCGTTGCTGCCGCCATGCTTTTCTAAGCCATTACT
CAATATAATTAATTATTTATTTGTTTG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E31108g_CDS-001

Protein length: 237 aa.
Product: Cell wall protein, putative

>YALI0E31108g_CDS-001 MHFSAVLLAATAGLVSAQKFGLIAIHSGSDVQNSAINSNGNQLVIGGGEPTTYEVKDRGL
YANGKPVEFGQYAFIEETDGQATRDIIVNGQDHLYVPRFDFVACPDGKNGYVLANQDACA
NGAIGIVARAVYSDGESAAANSSPAAEATKSAVVTSKSTVQVTITSCADDKCHKETAAAA
SPAPAPAKTTPGAIVSQIGDGQIQAPPSTQPAQANGAAAMGVSAVAGVVVAAAMLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG