YALI0E31130g

Overview

Description some similarities with uniprot|Q6BSM8 Debaryomyces hansenii DEHA2D07634p
Locus type CDS
Locus tag YALI0E31130g

Location

Species Yarrowia lipolytica Positions 3669983..3672635
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2653 (nuc.)
Previous locus YALI0E31108g Next locus YALI0E31152g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31130g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31130gYALI0E31130g_mRNA-001YALI0E31130g_CDS-001

Nucleotide sequence

 

>YALI0E31130g
ATGTCGACCTCGGCAGCACCAGCGACCGATTATACGCCGATTGAACAGCTGTTGGCGTTA
CTACCAAAGCTATTGGAGGGAAACGGTAACCTCGCCACGGTCACACAACTGCTCCCTCAT
GGAGTTTTGGAAACAATTCTCAACTCACCCTATGGACCCGCGCTCGTAGACATTCTCAAC
CAGGGCGTGGGAAATCGACCACTGGAGTACTCGGATCGAGTGCTCTCAATTCTGCCCATC
CCACGATACGCATGGACAGGAACTGGAGTGGTGCAGGTACTCAAGATGTCTCATGAAGTG
ATTGGCAACAACATTCCGCCATGGCTGATCAACATGGTCATGACCACACAAGCAAACATT
TTCGGTAACTTCCCCAACAGGAAAGACATTGCACCTAGTGGTGTTTTTGTGGCCGTCTTC
TGTATCCTGGCCTTTGGCCACTTTTACGTCTTCGGCAAGGGAGTGTCACGAAAACACTAC
TTCTGGCCGTCATTCGGGCTCGGTTGGCATTGCATTCTTAATACAATTGGCTACGGCCTA
CGAATCGGCTGGGGAAGAGACGTGACCAACATTCGAATTGGCATTGCATCCACCATTCTC
ATTGTGGCTAGTGTGGTCTATGTCAACGCCATGAACCTGCTTCTGGGACACCGAATTCTC
ACATACAGACATCCCGAAACAGGAGATTCGACGTGGTTTGGTACCCTTATGATTGTCAAC
TACATTGTCATCATCGGTATCATTATCATGGCCATCTGTTCCCAGGTGACCATCTTCATC
TACTTCCTCGACTACGAACATTGGCGTCAAGCAACAGGTGCAATGCAAGCAGCGTCTGTA
TTTGCCGTTGCGGTAGCATCTGGAGCGCTGATCAACATCACCATCGCATACTCGCTCCCC
CGTGGAGCCCTGGCACTGCATAACGACGACAGAAGACGTCTCACCGCCTCGAACATTGAA
TCCTACGGCATCTTCTGGTACCCTCCGAAGTACTCGCAGGTTTTGCAGTACGAGGCTGAC
CCCAGTGCCAAGCTGGACTCTGGCAAGCTCGCCGCTCGAGTGTTGAACGGTCGAGACCTT
GGTACCTCCACTATCATCATCATTATCACCACCGTGCTTCTTACCGTGTCTGCTGCTCTT
AGATGTGCAACCACCTTCATTGGCTCCCGGTGGGAGCCCAATGAGGCCCCCATCTACTCG
GGTACCCTCTTCTACATTGGCTTCGGCGTGTTTGAGACCATCACTAACGTCATCTACTTG
GTGACTCGCATCGATCTGCGTTTCTACATCCCCGATTGGCCCCTCAAGGGTTCCGGACCG
CTCACCATCAAGCCCGGAACCATGGAGATCTACAGAGACCCCTATTCTGCACCCCCCAAG
CCCGGCCCCGACGGAAAAACCAAGTCTGTCAACTATGGACACTACGCCAACGCCGCTGGC
CTGGACTACAACATCCCCGGCATGCCCACAGACGGCCAGAAGCTCCCCCACACTGGTGTC
TCCACCAGTCTGGCCCACAACATGGCTGCAGGCATTGCTACCCCCGCTACCCCCGGCATC
GCTCAGATGCCCGGTTACACCGCCACTGGTCTGGAACATACAACACCTGGTCTTACCCCA
GGTATGACCCTGACCCCCGGCTATGCAACCACACCAGGATACAACTTTGTTCCTGGTACC
GGAATGTCTACTCTGACTCCCGGAATGGCCACCATGACTCCCGGCATGACCCCTGGCATG
ACCCCTGGTATGACCCCAGGTATGACTCCTAGTTTCCCCGGCATGATGAGCCCCTCTATG
AGCCCCGGTTTCACCATGCCCCCTGGCTTTACATCTGCAACTCCCGGAGTTCCTCCAGTT
GCTGCTACACCTAGTCTTTCTCGATCAGCTCAGGGCCACCAGGCTTCTCATGCTCTGGCT
CGAGATCTCGGAGAACGAGGCCCATCGCCTGCAGTTGGAAACTTCCAGGAAGCCACCTCT
CTGCCCTCAGACTCTTCCTTCAGAGAGCCTACCCCCATTAAGCCTCCTTCCCCTGTGGGT
GCTAATTCTCCTACTGTCGGCCAGGAGCTCATGGGAACCGTGCCTCCTACACCTGCACAC
AAAATGGCTCGTACTCCTCTACCTGCTGCTACTCCTGCTCCCATGCCGGAGGTTACCTTT
GGAGATCCCTCTTTGGCCTCTCCTTCTCTTCATGAGCCCATGCCCAGCATTGTGGCTCCT
GAGGCCCCTCGAATTCCCGAGATCGTTTCTTTCCCTCAGACCCCCTTCCAGCCTGAGCGA
CGAGCTGTCACTCCTGCTCATTTTCCCGAGCCCATTCTTTCTCCCGCTACGCCTGCTCAG
TTCCCCGACCCTCACACCTCCATGTCCACTTTTAGTGGCTCGGTGACCAAGTTCCCTACT
CTGGCCGAAGCCTCGTATGGTACACCCCAGATGGAGCGAGTGTCCATCCCTTCTCCCATC
CATGACTACGATCCCCATTACGGGCAGCCTTACGAGGAGCCTGAGGACGAGTATCGACGC
AGCGGCGGATCCGAAGAAGCCATGTAGGCTTCGAGTTTAAGCTGATTAAACCCGCTTGGA
CATTTATTTATTGGCAGGGCACTGCCGCGCTAACTTTTTAGTACATGTAATAATTATGAA
TTTTCTTAATGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31130g_CDS-001

Protein length: 849 aa.
Product: Conserved hypothetical protein

>YALI0E31130g_CDS-001 MSTSAAPATDYTPIEQLLALLPKLLEGNGNLATVTQLLPHGVLETILNSPYGPALVDILN
QGVGNRPLEYSDRVLSILPIPRYAWTGTGVVQVLKMSHEVIGNNIPPWLINMVMTTQANI
FGNFPNRKDIAPSGVFVAVFCILAFGHFYVFGKGVSRKHYFWPSFGLGWHCILNTIGYGL
RIGWGRDVTNIRIGIASTILIVASVVYVNAMNLLLGHRILTYRHPETGDSTWFGTLMIVN
YIVIIGIIIMAICSQVTIFIYFLDYEHWRQATGAMQAASVFAVAVASGALINITIAYSLP
RGALALHNDDRRRLTASNIESYGIFWYPPKYSQVLQYEADPSAKLDSGKLAARVLNGRDL
GTSTIIIIITTVLLTVSAALRCATTFIGSRWEPNEAPIYSGTLFYIGFGVFETITNVIYL
VTRIDLRFYIPDWPLKGSGPLTIKPGTMEIYRDPYSAPPKPGPDGKTKSVNYGHYANAAG
LDYNIPGMPTDGQKLPHTGVSTSLAHNMAAGIATPATPGIAQMPGYTATGLEHTTPGLTP
GMTLTPGYATTPGYNFVPGTGMSTLTPGMATMTPGMTPGMTPGMTPGMTPSFPGMMSPSM
SPGFTMPPGFTSATPGVPPVAATPSLSRSAQGHQASHALARDLGERGPSPAVGNFQEATS
LPSDSSFREPTPIKPPSPVGANSPTVGQELMGTVPPTPAHKMARTPLPAATPAPMPEVTF
GDPSLASPSLHEPMPSIVAPEAPRIPEIVSFPQTPFQPERRAVTPAHFPEPILSPATPAQ
FPDPHTSMSTFSGSVTKFPTLAEASYGTPQMERVSIPSPIHDYDPHYGQPYEEPEDEYRR
SGGSEEAM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG