YALI0E31086g - TPS3

Overview

Description uniprot|Q6C3Z3 Yarrowia lipolytica YALI0E31086g TPS3 Alpha-trehalose-phosphate synthase
Locus type CDS
Gene name TPS3
Locus tag YALI0E31086g

Location

Species Yarrowia lipolytica Positions 3662610..3665909
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3300 (nuc.)
Previous locus YALI0E31064g Next locus YALI0E31108g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31086g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31086gYALI0E31086g_mRNA-001YALI0E31086g_CDS-001

Nucleotide sequence

 

>YALI0E31086g
ATGACGTTAATTGTGGTGTCATTGTGAGTACCAAGGGCGGAATGGAGGCGTTTTGAGCAG
TAATTTGCCACAGATTTACCACCAACATTCGCCACACAACGCTAACACAGATTCCTTCCT
TACACCATCAACTTCAATCTCGATGAGGGACAACGACCCAAGGTGGACGTGACCACGGAG
CCGGTGGCGCCTTCGCGACCTCCAATCAGTCGCTCCAACTCGGATCTCAAGACTCTCCCG
ACGGTGCCCAAAAGTGGAGGCGTTTCCGCTCTCACTCTGGCCCTTGAACGATTCCCTCAG
GAGAAGCCCTCTCAACAAAACTCCGGCGGCTCCTCCCTTACCTCGTCCGTGACACAGACA
CCCAACCCGGCTCTCCCTTCCATGTTCCATAAGGCCGAGCCTACAGGTCCTGCTCCCGCC
ATCGTCCACCCTGACGAATTCTTCAAGCCCTCTCCGCATGCGCAAGCCTCCGCTATTGTG
CAGCCTCCATCAGCGGTGGCAGGGGCTCTACAAGTCTCGTCTGCTGGATCACCCCAGCAG
GCCGGATTCTTGGAAAACGAACTTGCTCTGCAGAAAATGAAGCACCCTACTGTTCCTCCG
TCTGCTTCGGAACCGTCGTCCGTGTCTTCAGCCAACTCCAACCCAGCAGAGTATCCTACG
CTTCGGCCTCCCCGACCGCAATACAACCAGCCTCAGTCCCGTGCCTCCTCACCACCCCCT
AGAGTTGTCGACAAGCGTCGCCCCGTGTCTGGACAGACAGCCATGCGGTTTATTGACAGA
TTCGGGCAGCAGAAACCCAGCGATTCGTTTCAATCCGCCAAGGACTGGACTGTGGAGAAG
TCGCACAAGGGTAACGGAGGTCTCAGAAATGCCGTCAACCGATATTGCGCTTCTACTAAC
CATAAGAAGCTGTGGGTGGGAACCCTTGGCATGCCTTCTGATGAACTCGGAGACGTCTCC
AAGGTGGAAATCGAGCGCAAACTCACTCGAGAGTATGATTCAGTACCTGTGTTTGCTCCT
GATAACACCTTCGAAGCCCACTACACACACTACTGTAAGGGTATCTTGTGGCCCACTCTC
CATTATCAGACACCTGACTCAGACAAGTCAAAGGCATACCATGACCACTCTTGGGAACAC
TACAAGGCCCTTAACCAGATGGTTGCCGACAAGGTGATTGAGGTGTACAAGCGTGGAGAC
GTTATCTGGATTCATGACTACCATCTTCTGCTCGTTCCTGAGATGGTTCGTCAGCAGCTG
CCCAATGCTCGAATCGGAATGTTCCTGCATGTCACTTTTCCTTCCTCTGAGGTGTTCCGA
TGCTTGGCTGCACGAAACGAATTACTTACAGGTATGCTTGGTGCAACTTGTATTGGTTTT
CAGACTGCTGAGTATGGCCGACACTTCTTACAGACATGCAATCGTCTGCTTGTCGTGGAT
GCTTCTGTCGACGGAGTAGAGAACAACGACGGCCGTTTTACTGCTGTAGTTGCTTGTCCT
ATTGGTATTGACCCTCCTTCTCTTCAGAAGCACTTTATGGACCCTGAAGTCGACAAGTGG
CGTCGACTGATCCGTGCACGATGGCCTGGGAAGCGATTACTTGTTTCCAGAGATAAGCTC
GATTCACTGCGTGGAATCAAGCAGAAGCTGCTGGCTTATGAACACTTTCTGATCAACAAC
CGGGAGTTTTGCGATAATGTTGTCCTTGTACAGGTATGTTTGTCTGGAAACGAGTCGGAT
TCTCTCGAGGGAGAGCTGGTGCACATCATGGACCGAATTAATGCTCTTACCGATGACCTG
AGCAATCAGCAGGTCATCTTTTTGCATCAGGATATCGAGTTCGAGCAGTATTTGGCCATG
CTGGCCGAGGCTGAGGCATATGTTGCTCTTTCTCTGCGAGAAGGCATGAACCTGACCTGT
CATGAGTTCATCTTGTGTAGCAAGGACAACAGTGGTCAGCTGATCTTGTCTGAGTTCACT
GGTTCTGCCTCCGTTCTCGACAACGACGATGTGCTTGTTGTCAATCCCTGGAACATGCGA
CAGGTCTCTGATGCATATAAGACAGCTCTTACAATGGACCGAGGGACTCGGGAGAAGCAT
CGAGGACGTCTGGTCGAGTTTGTGGAAGGCCATACTTGTCTGCAATGGGCCACTACTTTC
CTGCAACATCTGGAAGATGCCTGGGTGGAGCACCAAAAGTCCAAGCGACTGTTGCCCAGA
TTGAACATTGCGTATGCCAAGGAAAGGTACGATATTGTTGCCAAGCAGCCTGGAAAGTAT
CGGTTGTTCCTTCTCAACCTGGAAGGGCGAGATTTTTCCTCTCCTCACACTTCCAAGCCT
GCACTGTCCTCCTCAGCTGCTGTCTACTCGTCCACTCACAACAGGATCCCCATTCTCACT
GAGCTGGTTTCGGACCCTTACAATGTGGTGTACATCATCTCCTCTGATGCCAGGCACGAT
ATTGAGCGTCTGTTCCGCAACGTCCCCAACCTGGGTATTATTGCTGAGAACGGTGGCTAC
CTGCGCCCTTACAGATCTGACCAGTGGATCCGGATGTGTGACGAGGAGGATGTACATAAC
TGGAAGGACTCTGTGCTAGAAGTCCTGGAGAGTATCAAGGAGCGATGTCCGGGATCTTCT
ATCAAGAGCGACGAGACCACCATCACCTTCCAGTTTACTCCGCAGTACTCTGCTGAGCAG
GAGCAGGACTTCTCGTTTGACTTTGCCGGAGAATGTGTCTCACACATCAACGACGCCTTC
TCCACTCAGAACATTACTGCCCGATTCAACGACGACCGTATCCTGGTTGAGAACCAGCAG
CTCTCCCGTCTGGCGGCTGTGAAGCGCGCTGTGGCCATTTTTGAAAAGACGTGCAAGATT
GGAGGAGACATCGAGTCCAAGGGCATCAACTCTGGCCACCTTACCGTTGCTCCTTCGTCT
CCCACGCTCACAAGAACACGGTCATACACCATCAGTGCTCCTGGTCCCTCTTACGATGCC
ACCATTTCCTACGTGTTTGTGGCTGGTAACGACCAGAGCGACTACCCCGTGATCGAGTGG
GCCAACTCTCTCGGCGATGTGGAGACAGTGCTTACTGTCGGCCTTCATTCGGAGCACAGC
CCTGCAGCTGTCAGTGTTGAGGGTCTCAACGGTCTGACTCTGGCTCTCCGAGAGCTTGCC
GTGGGAGACCGCAGTGATATCAAGGGCGACCGAGATACGCGAGAAAGAACGCCGTAGACT
TAGTCAGCTCTTCAGCTAACATAGAATTATAGAACATTAGAGTGTAACTTTCGGATGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31086g_CDS-001

Protein length: 1050 aa.
Product: Alpha-trehalose-phosphate synthase
Gene: TPS3

>YALI0E31086g_CDS-001 MTLIVVSLFLPYTINFNLDEGQRPKVDVTTEPVAPSRPPISRSNSDLKTLPTVPKSGGVS
ALTLALERFPQEKPSQQNSGGSSLTSSVTQTPNPALPSMFHKAEPTGPAPAIVHPDEFFK
PSPHAQASAIVQPPSAVAGALQVSSAGSPQQAGFLENELALQKMKHPTVPPSASEPSSVS
SANSNPAEYPTLRPPRPQYNQPQSRASSPPPRVVDKRRPVSGQTAMRFIDRFGQQKPSDS
FQSAKDWTVEKSHKGNGGLRNAVNRYCASTNHKKLWVGTLGMPSDELGDVSKVEIERKLT
REYDSVPVFAPDNTFEAHYTHYCKGILWPTLHYQTPDSDKSKAYHDHSWEHYKALNQMVA
DKVIEVYKRGDVIWIHDYHLLLVPEMVRQQLPNARIGMFLHVTFPSSEVFRCLAARNELL
TGMLGATCIGFQTAEYGRHFLQTCNRLLVVDASVDGVENNDGRFTAVVACPIGIDPPSLQ
KHFMDPEVDKWRRLIRARWPGKRLLVSRDKLDSLRGIKQKLLAYEHFLINNREFCDNVVL
VQVCLSGNESDSLEGELVHIMDRINALTDDLSNQQVIFLHQDIEFEQYLAMLAEAEAYVA
LSLREGMNLTCHEFILCSKDNSGQLILSEFTGSASVLDNDDVLVVNPWNMRQVSDAYKTA
LTMDRGTREKHRGRLVEFVEGHTCLQWATTFLQHLEDAWVEHQKSKRLLPRLNIAYAKER
YDIVAKQPGKYRLFLLNLEGRDFSSPHTSKPALSSSAAVYSSTHNRIPILTELVSDPYNV
VYIISSDARHDIERLFRNVPNLGIIAENGGYLRPYRSDQWIRMCDEEDVHNWKDSVLEVL
ESIKERCPGSSIKSDETTITFQFTPQYSAEQEQDFSFDFAGECVSHINDAFSTQNITARF
NDDRILVENQQLSRLAAVKRAVAIFEKTCKIGGDIESKGINSGHLTVAPSSPTLTRTRSY
TISAPGPSYDATISYVFVAGNDQSDYPVIEWANSLGDVETVLTVGLHSEHSPAAVSVEGL
NGLTLALRELAVGDRSDIKGDRDTRERTP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG