YALI0E29953g

Overview

Description weakly similar to uniprot|H6BPS2 Exophiala dermatitidis phosphatidylinositol glycan, class H
Locus type CDS
Locus tag YALI0E29953g

Location

Species Yarrowia lipolytica Positions 3544717..3545426
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 710 (nuc.)
Previous locus YALI0E29931g Next locus YALI0E29975g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29953g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29953gYALI0E29953g_mRNA-001YALI0E29953g_CDS-001

Nucleotide sequence

 

>YALI0E29953g
ATGCCATGTACTCAATCGCCATACAAGGACTATCATTATGAAGAGCGTCGCGTTGGCTCT
TCGGTCGAATTCACTGTCAAAAATCTGTCAAAAACGCGCGCCAAAATAATCACCACATAT
GCCACATGTCTATTAAACAAGGTCGTCGTGGTCTTGCTGATGCTGGCAACAACAAGTATC
TGGCTGGAGGAACACAAACCTGCCTACCAATATGTGGGCGAGTCGACCCTTTCAAAGATC
GCGACAGCCTATCCTCAATGGTTGCTCGGGTTTCTTCGAAACAAAACACCAACCATCGCA
CTCTTGTCTTTGTGGGTCCTGGCTATAATGGCACTCATGAAACGTCCATATAAGATTGAG
TCCTTGTTTGTGGTCCACGGAATTGGCCTGCAAGTGTATTCGTCGGGTGGCTACTATTTC
ATGGGTCAGACGACGTTCCTGAACCTCGATAGCATCATCGATCTCGTGATTCACGAAGGG
TTCAAGGGGTTGGAGGTGATATTCTTTATGACCATTCTCGTTAAAGACAAGGACCGAACT
GTGGTCATATTCCCCGATTTGCTCCCTCGGCGGGAGCTCCTGGAGAGAGTCTGGAGAGAA
AGTCGAACATGCTTGTATTCTGACCAGCCTGAACGGTTCCGCAAACCTGAATTGAAGTAG
TAGAAGTAGTATAGAAGACGTACATAGATTTATTTATTCATATGCAGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29953g_CDS-001

Protein length: 220 aa.
Product: Conserved hypothetical protein

>YALI0E29953g_CDS-001 MPCTQSPYKDYHYEERRVGSSVEFTVKNLSKTRAKIITTYATCLLNKVVVVLLMLATTSI
WLEEHKPAYQYVGESTLSKIATAYPQWLLGFLRNKTPTIALLSLWVLAIMALMKRPYKIE
SLFVVHGIGLQVYSSGGYYFMGQTTFLNLDSIIDLVIHEGFKGLEVIFFMTILVKDKDRT
VVIFPDLLPRRELLERVWRESRTCLYSDQPERFRKPELK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG