YALI0E29975g

Overview

Description weakly similar to uniprot|P11353 Saccharomyces cerevisiae YDR044w HEM13 coproporphyrinogen III oxidase
Locus type CDS
Locus tag YALI0E29975g

Location

Species Yarrowia lipolytica Positions 3545439..3546896
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1458 (nuc.)
Previous locus YALI0E29953g Next locus YALI0E29997g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29975g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29975gYALI0E29975g_mRNA-001YALI0E29975g_CDS-001

Nucleotide sequence

 

>YALI0E29975g
ATGCACATGGCTCACAATCGAACCATCCGAACCTTATGCATGTATGGCCTTATTTCAAAT
CCTCTTCGGGGCACTATAAGTCTCGAAGCTAAACCCACATATCTCAACTTGCACAAACTG
CAACCCCACATTTCGCCTACCTGTGCAACAATGTTCCGTTTTGCTCGTAAAATCAAAGTC
GGAGCCCCTTCGCTGACCCCCTCGCTCACCAAGAAGGCTGGCGCCTTTGCTTTCGGTGCT
GTCACCGGAACCGTGCTAGCTGTGACCTTCCCTCTTAACGTGGAGAAGCCCAAGTTCACT
GAGGATCTTACCCAGCTGATCCGAGAGTTCAAGGCTTCTCAGCCTATTAGCAACGATGCT
GTCAAGGCCGCTGCTGTGCCCCAGTTCCCCCAGCTTGACGAGTTCGACTTTGGTAACGAT
CAACGACCCATCAAGCTCCGAATGGAGGACTTCATCAAGAAGATGCAAAAGGAGATCGTG
GCCGAGCTTGAGACTCTTGATGACACCTCCACCTTCCGAGTTGATGAGTGGCAGCGTGGG
CTCAATGGCGAGGGAGGAGGAGGAATTTCTTGTGTTCTGCAGGATGGTAAGGTGTTTGAG
AAGGCCGGTGTTAACATATCTATTGTTCACGGCCTGTTGCCCCCCATGGCTGTCCAGAAG
ATGAAGGCTGATCACAAGAGTATTCGACCTTCCAACGATGGAAACCTCCCCTTTTATGCC
TGTGGTCTGTCTATGGTTCTCCACCCAGTCAACCCCATGGCTCCTACTGTCCACCTCAAC
TATCGATACTTTGAAACCATGAACTCCGATGGTACCACCCAGGCTTGGTGGTTCGGTGGA
GGAAGCGATCTTACCCCCTCTTACCTGTTTGAGGAGGACGCTGTTCACTTCCACAAGACT
CTCAAGGAAGCTTGCGACAAGCACGACAAGGACTACTACCGGAAGTTTAAGAAGTGGTGT
GATGAGTACTTCGTCATTAAGCACCGACAGGAGGCCCGAGGTGTCGGAGGTATCTTCTTC
GATGATCTCGAGAACAAGGATCCCGAGGAGCTCTTTGGTTTCATCCGGTCTTCTCTTCGA
TCTTTCCTGCCCTCTTACATGCCCATCATCCAGCGACGAAAGGATCTCCCTTACACTCCC
GAGGAGAAGCAGTGGCAGCAACTCCGACGAGGTCGATACGTCGAGTTCAACCTTGTCAAC
GATCGAGGAACCGCGTTCGGTCTGCAGACTCCTTCTGCTCGCATCGAATCCATTCTCATG
TCTCTTCCTCTTACTGCGTCTTGGATGTACGACCACAGACCCTCTGAGGGATCTCGAGAG
GAGCGACTGCTCAAGATTCTCAAAGAGCCCCGTGAGTGGGTCTAAGGAACGGTCAACATA
CTTGTACATATGATACAGAGCATTGGGATGGATAAATAGTATATAGTAAAGAAGATATGA
TATGATTAATGATAGCCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29975g_CDS-001

Protein length: 455 aa.
Product: Conserved hypothetical protein

>YALI0E29975g_CDS-001 MHMAHNRTIRTLCMYGLISNPLRGTISLEAKPTYLNLHKLQPHISPTCATMFRFARKIKV
GAPSLTPSLTKKAGAFAFGAVTGTVLAVTFPLNVEKPKFTEDLTQLIREFKASQPISNDA
VKAAAVPQFPQLDEFDFGNDQRPIKLRMEDFIKKMQKEIVAELETLDDTSTFRVDEWQRG
LNGEGGGGISCVLQDGKVFEKAGVNISIVHGLLPPMAVQKMKADHKSIRPSNDGNLPFYA
CGLSMVLHPVNPMAPTVHLNYRYFETMNSDGTTQAWWFGGGSDLTPSYLFEEDAVHFHKT
LKEACDKHDKDYYRKFKKWCDEYFVIKHRQEARGVGGIFFDDLENKDPEELFGFIRSSLR
SFLPSYMPIIQRRKDLPYTPEEKQWQQLRRGRYVEFNLVNDRGTAFGLQTPSARIESILM
SLPLTASWMYDHRPSEGSREERLLKILKEPREWV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG