YALI0E29931g

Overview

Description weakly similar to uniprot|H8X4D7 Candida orthopsilosis DNA cross-link repair protein
Locus type CDS
Locus tag YALI0E29931g

Location

Species Yarrowia lipolytica Positions 3541752..3544296
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2545 (nuc.)
Previous locus YALI0E29909g Next locus YALI0E29953g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29931g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29931gYALI0E29931g_mRNA-001YALI0E29931g_CDS-001

Nucleotide sequence

 

>YALI0E29931g
ATGAGTACCTTTGACGGTATTATCCGTGAGTTTCCGGAAATCCGGGTGGACTACTTCCAC
GACAGAGGCAAAAAACATCCCGTGCGACCAGAAGTATGGCTTCTTAGTCATGTTCATACT
GACCACACTGCAGGTCTGGAGAATGTTGGAGGGCTAGTTTATTGTTCGAAGGTGACGAAG
AACATGTTGGTCGAAAAAGACCCTCGCAGCAAACGCCACAAGGCCTACAACGATATGGCA
GCTATTCCCAACGGTACTCTAAAGTCGAAGTACACACCTATCCAGGATAGATTGAGAGGC
CTGGATCTGGATACCCCGTTCGAGATCAACGTGGGGGCATACACGGTTTCAGTAACTCTT
CTAGATGCCAGCAACCACTGCCCTGGAGCTGTCATGTTTCTTCTTCAAGGTAAGGGCAAG
TGTGTCCTATACACAGGAGATATTCGGGCGGAAAAATGGTGGCTGAGGTCGTTAGAAAAT
CACCCCTTGTTACTACCATACATTTGTGGAGTGAAGAAGCTCGATTGCATTTACCTGGAT
ACTACTTTCGGGTATAGAGGAGAGCCCTACATCAGCCTGGTAGACAACAACACGGGGCTT
GGCAAGCTCATGAAGCAACTGAGTAGGTATCCTCTTACGGGAAGTATACAGTACTTCCTG
CCACGATATACCTCTGGGTTCGAGCTCATTTGGCAGTACCTTGCTGCTGCATATGATTGG
AAGGTACACATGGAGGAGGATGAATTACAAAGGGTGTCTAAAGTACTCCAGGTTGAGGGT
CGCTCGCACTACATTAAGTATCTGACCAAGGAGGCTGCGGAAGCCACTCTTCATTGCTGC
TCGTGCCAACGGACTAGCTCATCCTCGGTGCTACTCTTGCCTGTGGTGAACTACCTGGCA
TCTCATGTTGACGAACACAACCGACCCAAAAAGGAATCTGAACTCCAGTTGGTGGGGGTT
AAGGATTTACTGAGGCGGTTGTCAGAGGAGTACACATCAAGTAACGAGTCCCATCTGTCT
GACGTGATTGATTTTGAATCCGGACAGAGATTCATCAAAACTGAATGTGAGCAAGGGTTA
GATCTTTATCTTCCAGATATGCTCCTGTTCCATTATTCTCGACATTCTTCGTATTTGGAA
TGTGAGGAGCTCGTGGGCCTGTTCAAACCCCGCTCAGTGTTCCCATGTGTGGTCAGCAAA
GATTCGTGGCAAAGAGGGTTCTCTATGGCGAGATTATTCGGACATGTTTGTCAAGAGCAC
GTTGATCAACCCTCGCAGTTCATGTACGATGTGGAGATGTGCATTGAAACAGCGAGACCG
ATCCCTAGGATTCGTGAACCAGTTCTCACTCTGAAGATTGATGGAAAACCTGCTGTCTCT
GGGCCATCTCAAGAAGCCAACTCGCAATCATTGCTAGTCCCCAAGACTGTCAAGTCATTC
CAAGTCAGAGCTCCAGGGACTCAGAATGTCAAGATGCTTCCTACTGGCGTGTTCAATCAA
ACAGATGCTTATGTTCCAGCTAGCGATAGTGGTAACTCTGACATCTTAGACCAGTTGAAC
CTCTACAAATCTCCTATCAGGTCACCGGTGAGAACGAAATCAAGCCCAGGAAGGGTAGAT
CACGCTGTCCGACCAATGCCACTGCCCACTACTTCTGTGCCCTCTGTGAAGGAAGAGCCC
CAGACTCCTTCATTTGGCGAAGCTCTGTCTATTCCGGTCCCCCCTGTCTCGTTTGCTTTA
CCAGTACAGCTTGCGACTGCACCTATCCCTGCATCTACTGCCATGCTCACAACTACACCT
ATGCCTTCATCCTCCCCTGGGATGCCCACGTCGTCTCCAGCGGATGCAGTTATGTCGAGT
CCATTCAAGAAGGCCACCTCCCTCAGTTCCATGTGCGAAGAAATGCCTGAGGAATGTGAG
TCAATTACTGAAAGTGTCGTCAAGGTGGAGCGAGACTCGGATGAGTTTTATGTTTCCGTC
AACTCCCTGCCTCAGTTGATTGCTAGAATCACAGCAGAACCGATTTCTCACACATCTCAA
CCTACCACTCAGCCGGAGCTTGGTTCGATGGTTGAACAACCTGAACGACAGAACGTATCA
ATGACAGAACAAGTGGAGGCGAAAGTAGCCGAATTTTCAAAGCCAATGAAGGATCTTGTG
AACCAGCCACAGGAAAATACACTAAGTCAACGGCGCATTTCACTACGTCCGGAGGTACCC
ACCGCTCCTCGACAACCACCCAGGATTACTGGTGTTCTGCGTCAAGCGAGCCTGTCTCGT
AAGCCTAGTGTTGCTCATCACTCCAGTCCCTCTCCCAGGTCTTCCAAATCACCACCGCCA
AAAAATATGTGCCCTGAACCATCCAAAATCATCATGGGACCGCCTGTTTTACGCAGAACG
GCTGATGATGTGTACGATATCTGCGAGAAGATCGGCCAGTGTCGTTTGGTAAGAAACAAA
CGAAAAGTCCATCGACCATTCAAAGTGGATCGATGGAAGGTTTCGCCTGTGTCTGAGTAG
CCTAATCTATTTATTTATTGTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29931g_CDS-001

Protein length: 840 aa.
Product: Conserved hypothetical protein

>YALI0E29931g_CDS-001 MSTFDGIIREFPEIRVDYFHDRGKKHPVRPEVWLLSHVHTDHTAGLENVGGLVYCSKVTK
NMLVEKDPRSKRHKAYNDMAAIPNGTLKSKYTPIQDRLRGLDLDTPFEINVGAYTVSVTL
LDASNHCPGAVMFLLQGKGKCVLYTGDIRAEKWWLRSLENHPLLLPYICGVKKLDCIYLD
TTFGYRGEPYISLVDNNTGLGKLMKQLSRYPLTGSIQYFLPRYTSGFELIWQYLAAAYDW
KVHMEEDELQRVSKVLQVEGRSHYIKYLTKEAAEATLHCCSCQRTSSSSVLLLPVVNYLA
SHVDEHNRPKKESELQLVGVKDLLRRLSEEYTSSNESHLSDVIDFESGQRFIKTECEQGL
DLYLPDMLLFHYSRHSSYLECEELVGLFKPRSVFPCVVSKDSWQRGFSMARLFGHVCQEH
VDQPSQFMYDVEMCIETARPIPRIREPVLTLKIDGKPAVSGPSQEANSQSLLVPKTVKSF
QVRAPGTQNVKMLPTGVFNQTDAYVPASDSGNSDILDQLNLYKSPIRSPVRTKSSPGRVD
HAVRPMPLPTTSVPSVKEEPQTPSFGEALSIPVPPVSFALPVQLATAPIPASTAMLTTTP
MPSSSPGMPTSSPADAVMSSPFKKATSLSSMCEEMPEECESITESVVKVERDSDEFYVSV
NSLPQLIARITAEPISHTSQPTTQPELGSMVEQPERQNVSMTEQVEAKVAEFSKPMKDLV
NQPQENTLSQRRISLRPEVPTAPRQPPRITGVLRQASLSRKPSVAHHSSPSPRSSKSPPP
KNMCPEPSKIIMGPPVLRRTADDVYDICEKIGQCRLVRNKRKVHRPFKVDRWKVSPVSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG