YALI0E29909g

Overview

Description weakly similar to uniprot|P32767 Saccharomyces cerevisiae YGL016W KAP122 Karyopherin beta, responsible for import of the Toa1p-Toa2p complex into the nucleus
Locus type CDS
Locus tag YALI0E29909g

Location

Species Yarrowia lipolytica Positions 3538813..3541744
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2932 (nuc.)
Previous locus YALI0E29887g Next locus YALI0E29931g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29909g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29909gYALI0E29909g_mRNA-001YALI0E29909g_CDS-001

Nucleotide sequence

 

>YALI0E29909g
ATGACCGAAATTGAAGAATTGGTGGAGTCACTCTACGTTCCGCGGAACGCAGACGAAATC
AAGGAGACGCAGCGACAACTCCAGGCCCAACAGCGAGGCCCTCATGGCTGGGAAATGGCC
AGACAGCTTCTACGATCCAACAGCTCTAACTGCCAGTTCTTTGGAGCCCTCACATACGCA
GTTCAGATCAATGCAAGGGCAGACTCAGGCAAGAACGGGACGGAGGATGACCAGCGACAG
GTGATTTCTGAGCTCCTGTCGTGGCTTGTGGGTATCAGAATCAGAGCAGAAGGTAAGGCG
TTTGTGGTCCAGAAGCTTCTATCAGTTATCAGTCTGGCTTTCCAAAGATACCCCTACGCC
TGGAGAGCCCCCGTCAACAGTGTAATTGCCACAATTACTACAGGGGAGGTGGTTCTGGAC
GTCTCGAGAGAAAACACTCCCCAAATCAATAATGCAGCCGACCTGCAACTAATCCTTCTA
TTTGCAAGGACTCTAGCTGAAGACCTGTCTCGGCCAAGTGGGTTTGTGGTCCAGGAAATG
AAGATGGTACTCAGGGGTATCATTGAAGACGACAACATGGACGCAATTATGGCTCTTTTG
ACGTCGGCACTCCAACAGGGCCTTGGGTTGGACTGTTTCAATTCTTGGGTAGTCTACGGA
TGTGGCGCTGACGCCAAAAGAATTCTGGAGCGGCTGTCAGAACTCAATAATGTGTTGCTT
CCATTCATTCAGACTGAGCAGCTGTTCGAGGAATCTGCGAAGCTGGTGTATGATGTGCTG
GAATCATGGCCCACTTACTTCTCACGCGTATGGAAGACACAACTTATTGACTTATTCATG
GGTGAGTGGGGTCAAAACACGTGGCAGAGCTTTGCTAATGATATGGACGTGTCTCTGGAT
TCTGCTGAGTGGTATGTCAAGCTCCTGACAAGTGTTTGTGATGCCTACCCCGACCACGTG
CTCTCCTTAATGACTACCCAAAAGCTTGCTCCTGGAGGTCTCATGGCTCTTCTTCTGAAA
CTGTCAGAGGGTGTTCCAGGGCTGACCCCTCTCGAGGATGAGAATATGTCGTCCGAGCTG
TTGGAATATTGGATGGGTTTGCTCGACACCTTATACGATAACCAGGGGAAGATCGACTCC
GAGCTGGTTGACAGTCTACTTCTTCAGGTCGCCTCGATCTTCTGGTCCAAGACGAAACTA
CCTGACCTGACAGAATCTACCGAAATGAAGGAGTTCCGACGAGACGTAGGTGATCTACTC
GAGTCTGTCTGCAGCATCGTTCCCACAAAGCTCCTGCAGAATCTTGCTGGTATCGTGACC
AGAAACATCGCTGAAGCAGAGCCTGACTGGCCTTCTGTCGAAGCAGCACTTTTTGGTCTC
ATCGCAGTGGCAGATAGTGACGACGACTCGGTGTCTGTGGTCTGCAACGACCCTTCGCTC
CTCCAAAAGATTTCCCAGCATCCCTCTGTCCGACTGCGAAAGAGTACCATTACCTTTGTC
GGCGTCTTTGACTCGATGTATGTTCATGGCCCTTGTCTCGGATCAGCTCTAGATTTCCTC
TTTGCCTCTTTGGAAGAGCCTACGCTCTCTTTGTTCGCCTCTCGTTCAATCTCCAAGCTG
TGTTCTGATGGTCGAAAGTCCCTTGGACCGATGCTGGCCTCATTTTTCCAGGTGTATGAA
CAGATGGTGTCAGGCAAGATGACCATGTCATCTTACTGTCACGAGAACACGGTAGAAGGT
ATCGCAGCCATCATTGAGAGCGAACCGTCCATTGCAAAGCAGTCGGAGTATCTTTCCCGC
CTGATTGACATTCTTGTTGATCGATCACACAAGGAGATGGCAAGGGCAGACCTTCCAGAC
GACCCCATTGTGTCCCTCTTCAAGTGTCTTATTTGCATTGGTAAGAAGCTTCAATCAGTT
GAAGAGGTGGATCTGGATGACACCAATACCTCGGCTGTTGCTGCTTTCTGGCAGTCGGAT
CCCAACCATGTGCAGCAAAAGCTATTGCATATCATTACCACTTTTGCTATCCAACAGGCT
CCATATAATACTTCTGTCGAGATTTGTGATCTCGCATGTCTGGTATTCAGAAAGGGCTTC
TCCGAAGAAGCTGGTCCTTTCGTCTTCTCCACTCAGGTTATCTTCGAGTTTATCAGCACC
AAGTTCAACCAATCTCCTGGATTCGCCCCCAAGGTAGTTAAGCTGGCTTCATGCTATCTC
ACTAGTACCACTGCATCTGCTTCTTCTCGTGATGAGTTCACCAAGGAGATCATTACCCTC
TTTTTCGCAGGTCCCAACCCCATTATTAACGGAGATGACGACATGGCCCACGACGTGCTG
GGTTTGGTGGAGAAGATTGCTTCGACGACTCCGGAACTCTTCTTTGTACATACGCCGGAG
TCATTGTTGCATGCCATTCTTTCTTATTCTGTTTCGGCCCTTGCATCCACTCAGATCCTC
GTCATTTCCACCTCCACCAGTCTATGGACAAACTTTTGCCTTCTCAAGCTACAGGGAGAG
GCTAAAGAGCGCCACTTGATGATCATGAAGGCTCTGGGACCCTCTCTCATTAACACTATC
ATGATGAAGATTTGTGGGGATGCTACTCGATCGTCGCTGTCATATTACTCGTCAGTGCTA
CGGAAGTACATCTACAAGTTTCCCATGGATGCAAAACACAACCTTGAGCACTTCGTCAAC
AACCCTGATACCAAGCCTGTCAAGGCCAGTGACCAGGACGTGAAGACTTTTGTCGCTAAG
CTTGTTAATCTGCGGGGACAGAAGCTGACTGATACCGTAGTTAAGGAGTTCTGGGTTACC
TGCTCTGGTTCCGGTCTGGACTACATTGTGTAAAGAGCCACACGCACATCGCATATATTT
AATCTACTCATGTAATCATACAACTATTGAATTTACAGCGCTGGTACAAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29909g_CDS-001

Protein length: 951 aa.
Product: Conserved hypothetical protein

>YALI0E29909g_CDS-001 MTEIEELVESLYVPRNADEIKETQRQLQAQQRGPHGWEMARQLLRSNSSNCQFFGALTYA
VQINARADSGKNGTEDDQRQVISELLSWLVGIRIRAEGKAFVVQKLLSVISLAFQRYPYA
WRAPVNSVIATITTGEVVLDVSRENTPQINNAADLQLILLFARTLAEDLSRPSGFVVQEM
KMVLRGIIEDDNMDAIMALLTSALQQGLGLDCFNSWVVYGCGADAKRILERLSELNNVLL
PFIQTEQLFEESAKLVYDVLESWPTYFSRVWKTQLIDLFMGEWGQNTWQSFANDMDVSLD
SAEWYVKLLTSVCDAYPDHVLSLMTTQKLAPGGLMALLLKLSEGVPGLTPLEDENMSSEL
LEYWMGLLDTLYDNQGKIDSELVDSLLLQVASIFWSKTKLPDLTESTEMKEFRRDVGDLL
ESVCSIVPTKLLQNLAGIVTRNIAEAEPDWPSVEAALFGLIAVADSDDDSVSVVCNDPSL
LQKISQHPSVRLRKSTITFVGVFDSMYVHGPCLGSALDFLFASLEEPTLSLFASRSISKL
CSDGRKSLGPMLASFFQVYEQMVSGKMTMSSYCHENTVEGIAAIIESEPSIAKQSEYLSR
LIDILVDRSHKEMARADLPDDPIVSLFKCLICIGKKLQSVEEVDLDDTNTSAVAAFWQSD
PNHVQQKLLHIITTFAIQQAPYNTSVEICDLACLVFRKGFSEEAGPFVFSTQVIFEFIST
KFNQSPGFAPKVVKLASCYLTSTTASASSRDEFTKEIITLFFAGPNPIINGDDDMAHDVL
GLVEKIASTTPELFFVHTPESLLHAILSYSVSALASTQILVISTSTSLWTNFCLLKLQGE
AKERHLMIMKALGPSLINTIMMKICGDATRSSLSYYSSVLRKYIYKFPMDAKHNLEHFVN
NPDTKPVKASDQDVKTFVAKLVNLRGQKLTDTVVKEFWVTCSGSGLDYIV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG