YALI0E29623g

Overview

Description weakly similar to uniprot|P40957 Saccharomyces cerevisiae YGL086w MAD1 spindle assembly checkpoint protein
Locus type CDS
Locus tag YALI0E29623g

Location

Species Yarrowia lipolytica Positions 3508588..3510779
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2192 (nuc.)
Previous locus YALI0E29601g Next locus YALI0E29645g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29623g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29623gYALI0E29623g_mRNA-001YALI0E29623g_CDS-001

Nucleotide sequence

 

>YALI0E29623g
ATGTCGGACACTCCCTCATCGCCGTTCATTGAGCATCCGGAAACCCCCAGGAAAGCGCTC
TTCAGTAGTAATCGCCCCTCTCCAGTTCGATCTACACACGCCACACCTTCGCTCCATGGC
ACACCATCCACCGCAAGTCGGTTTTCAAGAACCCCTAGAGAAGACGTGATCGGGCTTAAA
AAAACGATTTCGCAGTTGCGCTATGATTTGGAGGCACTCAAACAGGAGCAACAGGTTGCT
CAGATTCTGCAGGAGGAAAAGGAGCGAGAACTGGAGGCCAAGCACAAGAAAGAGCTGGAT
CGAGCTGAACAAGCAGAGTCTGACCAGGTGTTTCTGTTCAACAAACAAAAAGAACTCTCA
GACGAAAATCGCACGCTTAAAGAGGAATTGCGATCTCTTCAGTCTCAGCATGAGGCTGAT
GGACGTGAATTGAATCATGAACTGGAAGGATTGAAGGACTTGCTGAATGATCTACAATCG
GAGAACCGAGCTCTTGTGTCGGAAATGAACTACAAGATTGAAGACTACGAACACAGAATC
AAGGCGGCATCTACAACGACTGACGATCTGCTCAAGGAGGTTGAGAATAGAGGTACTGCC
CTCACAGAAGCTAAAATGAACGTGGTTAAATTCGAGCAGCTGGTAGAATCCTTGAAGGGC
GAATCATTGGATCTCAAACAGTCGGCCAAAGATCTGGAGGCTGTGGAGCAGACTAAAAGT
CAACTTTCTGACCAGATCAAGTATTCGCGAGAACTGGAGGCGAAAGTGTCTGCCCTGACA
GTGAGAGTAGAGGCGGCTGAGTCTGCACAGCAGCTCAGTCAGGTCTATGAAGAAGATCTG
AGTAGCATGAAGGGTAAATTGAAGAACATGGAAGGTCTCAGACAACAGCTAGCGGAACAG
CAGTTGCAAATTCTGGTACATGAGGAGAACAGCGCCAAGTGGAAGGCCTATTTGGAAAAA
TCGGACGAGTTCAAAACTGTGGAGGAGGTTGTCACAGCTCTTAACAAGGCTAGAATGGAA
AAAGCTAGCTTGTTGGAGCGTGCCGGTTCAGGAGTGAATGATGAAACCCGGTCTACAGCT
GAAGCATATGCGAGATTGCAAGAGCGAGTCACCACCCTTGAGTCCGAGCTGCAGCTGGCC
CAAAACCAACTCAAGACAGAGAAAAAGAAAGTTGCTACCTCTATCAGGCAGCACACACTT
GCTGCCAACGAGGCAAAGTTCCTTAGAGAGCAGCTGAAGGCGTACGATGATGAGGAGGTC
ACAGCAGCTGGCGCTGACGTTAAGCAGGGTCGTATTGACGAGCTGGAGAAACTGTTAGAA
GCGGTCAAGAACGAGAAGAGTGTTTTGGAAGGTGAATTGAAGGAGGCAAGAAGCGAGCAA
GGGTGTACTGTTGCTGCAGGTACCAAACGACCTCGCGCAGACGATAGTGTATCGTCAGAA
GTCATATCTGAGTACACACGTAAGTTGCAGACTCTTCAGCAGGAGTTTGATGAGGTCTCT
GTCGAGGCCAGACTTCTTGCAAAGACCAAGGAGGCCTTGGAGGCACGGCTTGAGAGTCTT
GAGAAGAGCCAGGAATCACGAGTGCGAATTCTTGAGCTGCGTGAGAACCCAACTTCTCGC
CATGAAGCTGTCAAGCAAAGCATGCTGGACACACTTAAAGCTGAGAACGAGGCTCTGATG
GGCAAGAACGAAAACTCAAAGTCTGTACCCCAGGCTTCACTTGAGAGAAAGCAGCTGGAA
CTCCAGGGTGTCAGAGATAAGCTGGCATCTACGGAAAAGTCGTATCAACGACTCAAGGAG
GTGTTCTCGGTCAAGTCGCTGGAATTTAGAGAAGCAGTGTATGCTCTAACTGGATACCAA
ATTGACATCCTCCGAAACAAAAAGGTCAAGGTCACTTCAATGTATGCTCAGTCTGATGAA
GACTCGTTCACGTTCTTGCCTGACCCCAATCATAAGGGTCAGTTTGCCGGAGTCATTGAT
AGTCCTTTGACTGACGAGTTCAGCAACATTGTGGATTACTGGGTGAAGGATAAGAAGGAT
TTTCCATGTTTTTTGGCAGCTCTCAACCTAGAGCTGTACGAGCGAAAGGAGAACAATGGT
AACCAGGCCAGCTAACAGCAACACATTATACATAATCATGATTATACATAATTATATTAA
ATCCAGGATAACCCAGGATAATCACAGCTCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29623g_CDS-001

Protein length: 705 aa.
Product: Conserved hypothetical protein

>YALI0E29623g_CDS-001 MSDTPSSPFIEHPETPRKALFSSNRPSPVRSTHATPSLHGTPSTASRFSRTPREDVIGLK
KTISQLRYDLEALKQEQQVAQILQEEKERELEAKHKKELDRAEQAESDQVFLFNKQKELS
DENRTLKEELRSLQSQHEADGRELNHELEGLKDLLNDLQSENRALVSEMNYKIEDYEHRI
KAASTTTDDLLKEVENRGTALTEAKMNVVKFEQLVESLKGESLDLKQSAKDLEAVEQTKS
QLSDQIKYSRELEAKVSALTVRVEAAESAQQLSQVYEEDLSSMKGKLKNMEGLRQQLAEQ
QLQILVHEENSAKWKAYLEKSDEFKTVEEVVTALNKARMEKASLLERAGSGVNDETRSTA
EAYARLQERVTTLESELQLAQNQLKTEKKKVATSIRQHTLAANEAKFLREQLKAYDDEEV
TAAGADVKQGRIDELEKLLEAVKNEKSVLEGELKEARSEQGCTVAAGTKRPRADDSVSSE
VISEYTRKLQTLQQEFDEVSVEARLLAKTKEALEARLESLEKSQESRVRILELRENPTSR
HEAVKQSMLDTLKAENEALMGKNENSKSVPQASLERKQLELQGVRDKLASTEKSYQRLKE
VFSVKSLEFREAVYALTGYQIDILRNKKVKVTSMYAQSDEDSFTFLPDPNHKGQFAGVID
SPLTDEFSNIVDYWVKDKKDFPCFLAALNLELYERKENNGNQAS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG