YALI0E29645g

Overview

Description similar to uniprot|A2QDC4 Aspergillus niger inorganic anion exchanger
Locus type CDS
Locus tag YALI0E29645g

Location

Species Yarrowia lipolytica Positions 3510778..3512561
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1784 (nuc.)
Previous locus YALI0E29623g Next locus YALI0E29667g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29645g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29645gYALI0E29645g_mRNA-001YALI0E29645g_CDS-001

Nucleotide sequence

 

>YALI0E29645g
ATGACGCTCAAACAAATCGGCAACTTCTTCGGAACCCCCGGTGTCGGCATATACCGCGAT
ATCAAAGGTCGCTTACCATACTACATCTCTGATTGGAAAGATGGTCTCAATTACAGAGTC
ATCCCCAGTACAGTGTACATGTACTTCACTAACCTCCTGCCGGCAATTGCTTTCGCCCAG
GATATGTTTGATAAGACACACAACGCCTATGGAGTCAACGAGGTGCTGATGGCCTCGGCT
ATGGGAGGAATAATTTTCGGCTTGTTTGCTGGGCAACCTCTATGTATTGTGGGAGTCACA
GGACCTATCGCCATCTTCAACTACACAGTTTATGATATCATCAAGAACAGAGACACCCCA
TATTTCCCATTCATGGCTTGGATTTGTCTTTGGTCCATGGTTATGCATTGGTTCCTGGCT
ATTTTCAATTTCTCCAACGGTCTGAAGTGGGTCACTCGATATTCCTGTGACGCCTTTGGA
CTGTTCATCTCAATCGTCTACCTCCAGAAGGGTATTCAGATATGCACACGACAGTTTTCC
GAAGTGGGGGACGCCTCTGGTTACCTCTCTGTCATCGTGGGCATGTGTATCATGATCTTT
GGATGCACCACGGTGCTTATCGGAAACCACTCCACATTCTTCAAGGGTTGGATACGAGGA
ATTTTTGCCGACTACGGACTGCCCCTTTGTGTCGTATTCTTCTCTGGGTTCGTACATTTT
GGAACCACCCTAGGTCACACCACTGTTCAGAAGCTGCCTACTACCAATGCATTCCAGCCC
ACCGACGAAATTAGAAATGGACCCGGGGGACACGGCTGGTTTATTCACTTCTGGGACATC
AAGGTAGGCGACGTCTTTTTGGCTATCCCATTTGCGATTCTGCTGACTTTGCTCTTCTAT
TTTGACCACAATGTGTCTTCGTTGATATGCCAAGGCTCAGAATTCCCCCTCAAGAAGCCA
GCATCTTTCCACTGGGATTTGTTTTTGCTGGGAATTACTACAGGAGTTGCTGGAATGCTT
GGAATCCCTGCTCCTAACGGGCTCATTCCCCAAGCTCCCCTCCACACTACTTCCCTTGTT
GTTAAGAAGGAGGTTTATATTGACGGAGAAGGACGTACTTATCCTGTCAACGACGAGACA
AAAGAAATGGCAAAGGACGCGCCTAGTTCATATACTCTGCTAACCATCAACGAATCCGTT
GTCGAACAGCGAGTCTCAAACTTCGCCCAGGGGCTCATGATTCTTGGTACTATGAGTGGT
CCTCTACTGGTGGTTCTAGGCCTGGTACCTCAGGGTGTCCTGTCTGGTCTCTTCTGGTGC
ATGGGATTGACAGGAGTGTACAACAATGGTATCGTGGCCAAAGTGGTGTTCATCTGTACT
GACGCAAAGTACATTTCTCATGAGAACGCTCTGTCACGAGTCAAACCAAGAAACCTGTAC
CTTTACACCATTCTGGAGCTGTGTGCATTTGCTGCAGAGTTCGGTATTACCCAGTGTATT
GCAGCTGTCGGATTTCCTGGTGTGCTTCTACTGTTCGTGCTCGTGTCCTACTACATTCCA
CGATTCATTCCGGAGCCAGACATGTCCATTTTGGACCAACCTACTGCCGAGGGAGTGGTC
ATGGAAAATCTCCGAACTAACCGAAAAACGAGTACTGACGACGAAAAACATTCCGAGGAG
GTGTCAACAAAAGAGGTTGAAGGTTGTCCAGCCGTATAAGCGTATTTAATTATTTATAGA
TAATGTTACTGGAACATATAGCAAGAATACTACATACTGTAGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29645g_CDS-001

Protein length: 573 aa.
Product: Inorganic anion exchanger, putative

>YALI0E29645g_CDS-001 MTLKQIGNFFGTPGVGIYRDIKGRLPYYISDWKDGLNYRVIPSTVYMYFTNLLPAIAFAQ
DMFDKTHNAYGVNEVLMASAMGGIIFGLFAGQPLCIVGVTGPIAIFNYTVYDIIKNRDTP
YFPFMAWICLWSMVMHWFLAIFNFSNGLKWVTRYSCDAFGLFISIVYLQKGIQICTRQFS
EVGDASGYLSVIVGMCIMIFGCTTVLIGNHSTFFKGWIRGIFADYGLPLCVVFFSGFVHF
GTTLGHTTVQKLPTTNAFQPTDEIRNGPGGHGWFIHFWDIKVGDVFLAIPFAILLTLLFY
FDHNVSSLICQGSEFPLKKPASFHWDLFLLGITTGVAGMLGIPAPNGLIPQAPLHTTSLV
VKKEVYIDGEGRTYPVNDETKEMAKDAPSSYTLLTINESVVEQRVSNFAQGLMILGTMSG
PLLVVLGLVPQGVLSGLFWCMGLTGVYNNGIVAKVVFICTDAKYISHENALSRVKPRNLY
LYTILELCAFAAEFGITQCIAAVGFPGVLLLFVLVSYYIPRFIPEPDMSILDQPTAEGVV
MENLRTNRKTSTDDEKHSEEVSTKEVEGCPAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG