YALI0E29601g

Overview

Description similar to uniprot|P53152 Saccharomyces cerevisiae YGL087c MMS2 part of the error-free postreplication repair pathway singleton
Locus type CDS
Locus tag YALI0E29601g

Location

Species Yarrowia lipolytica Positions 3507784..3508380
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 597 (nuc.)
Previous locus YALI0E29590g Next locus YALI0E29623g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29601g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29601gYALI0E29601g_mRNA-001YALI0E29601g_CDS-001

Nucleotide sequence

 

>YALI0E29601g
ATGGCCGCCAAAATGTGAGTATGGGGAGGAGGAAGTGTGGGAACAACCGTTGTTTTGATT
TAATCGCGGATTTGACTTACGTATTCCAAGCAAACGCCCAGAACCCCTAACTACATGGTC
ACGCAACCTCACCGTCCGGATTACTAACTCAGGCCCCGATCATTTCGACTCCTGGAGGAG
CTCGACAACGGTGAAAAAGGAATCGGATCCGAAGCTTGCTCGCTAGGACTGGCCGATTCC
GACGATATCGAAATGACTTTCTGGAACGGAACCATCCTCGGACCTCCCCACTCTGCCCAC
GAGAACCGCATCTACTCGTTGACACTCGAATGTGGCCCCGATTACCCCGACCAGCCCCCC
ACCGTCAAGTTCATTTCGAAAATCAACATTCCCTGCGTTAACCAGCAGAGCGGCGTGGTG
ATTCCCGCCAACCTGCCATGTCTCGCTCACTGGAAACGAAGCAACACGATGGAGACGGTG
TTGCTGGAGCTGCGAAAGGACATGGGCCAGCCCGCCAACAGAAAGCTGCCCCAGCCCGCC
GAAGGCAGTACTTATTAACCATTGCATTAGAGTAACAGAGCATGAGCACGAAAGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29601g_CDS-001

Protein length: 140 aa.
Product: Ubiquitin-conjugating enzyme variant, putative

>YALI0E29601g_CDS-001 MAAKMPRSFRLLEELDNGEKGIGSEACSLGLADSDDIEMTFWNGTILGPPHSAHENRIYS
LTLECGPDYPDQPPTVKFISKINIPCVNQQSGVVIPANLPCLAHWKRSNTMETVLLELRK
DMGQPANRKLPQPAEGSTY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG