YALI0E29293g

Overview

Description similar to uniprot|Q08920 Saccharomyces cerevisiae YPL178w CBC2 small subunit of the nuclear cap-binding protein complex CBC singleton
Locus type CDS
Locus tag YALI0E29293g

Location

Species Yarrowia lipolytica Positions 3467304..3468528
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1225 (nuc.)
Previous locus YALI0E29271g Next locus YALI0E29307g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29293g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29293gYALI0E29293g_mRNA-001YALI0E29293g_CDS-001

Nucleotide sequence

 

>YALI0E29293g
ATGTCTGAACCCGCGGATCTGTTCACAGCCAAGCCCATCAACTCGGCTCAGCGACTCGAC
GGCCCCTCTTCTTATGTCTTGCGACAAGCGCGAAGATCTCGACAGGGTGAGGAGGATCTC
GCTGCTCTGGATGTCACAACCACTCTCTATGTCGGTAACCTCTCATTCTTCACAACAGAG
GAGCAGATCCACGAGTTGTTCACCAAGTGAGTAACGCTCCCAATTGTTTCCCATGTGTGG
ATTTAGAAGCACAGGAGAGGATCTGAAGAATCAGGGACTTCGGGGATGTTAGACTGACGT
CTTCAAGACCAATTCAACCACTCTACGACTCGAGGACTTCGATCGACATGTAGATTGACT
GTTGAATTGTTTTCTGAGGCAGCTATCTAGAAACTGGAATATTAATTTCGGATTGCTATG
TCGCTTTTCTTGGAATCACTTCTCAACTGGAATCTCCCGAGTTCAAAGCATTATGGCATA
TCTCCCCGGCCTATACTAACACAGAATTGCAAAGGTGAAGAAGATCATCATGGGTCTCGA
CCGATACCAAAAGACTCCTTGTGGATTCTGCTTCGTGGAATACTACGAGCACGACGACGC
TGTCGCCTGCCTCAAATACCTGCATAAGACCAAGCTTGACGAGCGAATCATTACCATTGA
TCTGGATCCTGGCTTCAAGGAGGGACGACAATTTGGCCGGGGCTCCTCCGGAGGCCAGGT
GCGAGATGAGTTCCGACAGGACTATGATTCCGGTCGAGGAGGATTTGGAAAGCGATGGGG
AGATGATGAGCGAGGAGGAGATGATTACTGAGACTAAACCGATAGTCAGCCCAAAAAGAA
AACCCTCTGGTAATTCACCAGTAGATATTGTGGGTTTTGTTGAATAATAGGATTACATGG
ATCGGACAGGTTGGGATCGACGGGAAACAATCCAGATGCGTGTATTGCACGTGGGTGTTT
GGGACGCGCTTTGACACCGATAGGTTGATTGTTTGTTTGTTTATGATGACAGCTTATTGG
TGACAGGTTTCTGATGACAGGTTCTTAATGGTAGGATTACATTTCGTTAATTGGAAGCTG
ACAGATGATAGGTGTCAACTGAGAAGGAACTACACTAAGGTGTCAACACGTCAATGTCAA
CCAAACTCGCAATTGATATGTCAAATCTGTCAGTTTGTACCTTGCCAGATATGTACACAG
TTTAAAATATTATTTATATCCAACT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E29293g_CDS-001

Protein length: 171 aa.
Product: Small subunit of the heterodimeric cap binding complex with Sto1p, putative

>YALI0E29293g_CDS-001 MSEPADLFTAKPINSAQRLDGPSSYVLRQARRSRQGEEDLAALDVTTTLYVGNLSFFTTE
EQIHELFTKIAKVKKIIMGLDRYQKTPCGFCFVEYYEHDDAVACLKYLHKTKLDERIITI
DLDPGFKEGRQFGRGSSGGQVRDEFRQDYDSGRGGFGKRWGDDERGGDDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG