YALI0E29271g

Overview

Description some similarities with uniprot|P54785 Saccharomyces cerevisiae YMR070w HMS1 high-copy suppressor of MOT1-SPT3 synthetic lethality
Locus type CDS
Locus tag YALI0E29271g

Location

Species Yarrowia lipolytica Positions 3464462..3466063
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1602 (nuc.)
Previous locus YALI0E29249g Next locus YALI0E29293g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29271g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29271gYALI0E29271g_mRNA-001YALI0E29271g_CDS-001

Nucleotide sequence

 

>YALI0E29271g
ATGTTGTTGAAAATGGATAAGGTTGACTATGGGGGCTCGGTCTCCGTGCAACGAGGATAC
CACCATAATGGCCCGCGAGCTCTGGGCACTCTATCGTCTTCAAGGGCAACGAAGGCGCCG
CACAAGAGCAAATTCCGGCCTAGAAGTGCTGCCACAGTCCTGCTTCATTCCCAAGGCCAT
GGCTTGTGTCAACAAGGGAGCTTCAGAGACGCGTGTATGCTCTTAGGGCAAGACAAAGGA
AGCGGAGCAATTGTCTCTCCGAAAGACGATTTACACTTGGCTGACACTACATACAAAGCC
GGAGCGGAGCATACAGTTCATGTGTCGCTACCCTCGCTTTACCAAATCTTGCCCGAGTAT
CGCCTGAGGGCTGAGGACGGGGTAACTGACGGTGAGGGCAGGTCCAAGAATGGAGACAGT
ATTAAAGGTGCAATGTCGAAGAATTCTCACAACATGTACGGATACTCTTGGGACGCAAGC
CAATCGGGCTACAAGAATGCTCCAGTCAGCCCCAATGGCAACAACAACGCCCATAATCAC
ACTGGCCTGAACAATCACGCGAATCACTCTCTCAACTCGGTCAGTCCAGTGAATGCTGTT
AACCCCATCACTTCAGCTTCTCCTGTGAACCACCTTGGAGCACACACGGCAAACCTCTCG
GGCAGTCAGTCTGAAACACCCACTCCTTCCAACCACAATTCCACTCTCAATCATTCCCCG
CTGAACAACAACACCCCAGGAACTACCACCCCCAATAACGGTATGAACACTATGCCTACA
ATCAACAGCTCTGTTCCCCCGTCGATGCACACTATGCCAGCTTCAACTTCCGCAAACATG
AGTGGTCTCAACAACTTGAACAGACAGCCAACGTTGAACGGCCACTACAGTCAGGGACTT
TCGCCCCCCAAGCACACAGTTGCTCCCCAGAATGTTCAATACCCACAGCACATAGGAGTT
GGCTACTCAACTCCCTACATGGCTGGGACTGTCAACAACGGTGGGCTCCCCCACATGAAC
AACTACAACCAGTACGCTCTGCGTCGCTACGTGGACACAAACGTGTACCCCAAGCAGCAG
CAGGGCTACCAACCCAACCAGCCCCAACTTCAACAGCCTGTTCAGCCCGGTGTCCCGCCC
CAAATGCATAGCCAGCAGTCGATGCAACTGCCCCCACCCCATGGCCTGCACAATGGATAC
CGGCAGTACGATATGGTGCAACCTCAGATGGAACCCCAGAGGTACAACCCACCTGAACAG
CAGCAACCCACAGGAGACAAGCGACGGCGAGGAAACTTGCCCAAATCCGTCACCAGCATC
CTGAGAGAATGGCTCAACGACCATATTTCTCACCCATACCCCTCCGAGTACGAAAAGTCG
CTGCTTCTGCAGCAGACTGGCCTTACCATGAGCCAGCTTAGCAACTGGTTCATCAACGCT
CGACGACGACAATTGCCTGCCATGCAGCAACAAGGGGCGGAGAAGAAACGCCTTGAAGAG
GGGGAACGGCCCATCAGCCAGAAATACCATTGAGTGCCGCATATAGACCACTCCGCATAT
AGATGTATAGTAACTGAGGAAATAAATGATTAAAAAACCCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29271g_CDS-001

Protein length: 511 aa.
Product: Conserved hypothetical protein

>YALI0E29271g_CDS-001 MLLKMDKVDYGGSVSVQRGYHHNGPRALGTLSSSRATKAPHKSKFRPRSAATVLLHSQGH
GLCQQGSFRDACMLLGQDKGSGAIVSPKDDLHLADTTYKAGAEHTVHVSLPSLYQILPEY
RLRAEDGVTDGEGRSKNGDSIKGAMSKNSHNMYGYSWDASQSGYKNAPVSPNGNNNAHNH
TGLNNHANHSLNSVSPVNAVNPITSASPVNHLGAHTANLSGSQSETPTPSNHNSTLNHSP
LNNNTPGTTTPNNGMNTMPTINSSVPPSMHTMPASTSANMSGLNNLNRQPTLNGHYSQGL
SPPKHTVAPQNVQYPQHIGVGYSTPYMAGTVNNGGLPHMNNYNQYALRRYVDTNVYPKQQ
QGYQPNQPQLQQPVQPGVPPQMHSQQSMQLPPPHGLHNGYRQYDMVQPQMEPQRYNPPEQ
QQPTGDKRRRGNLPKSVTSILREWLNDHISHPYPSEYEKSLLLQQTGLTMSQLSNWFINA
RRRQLPAMQQQGAEKKRLEEGERPISQKYH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG