YALI0E29307g

Overview

Description similar to uniprot|P26570 Saccharomyces cerevisiae YML016C (ohnolog of YDR436W) PPZ1 ser/thr phosphatase required for normal osmoregulation
Locus type CDS
Locus tag YALI0E29307g

Location

Species Yarrowia lipolytica Positions 3470846..3473173
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2328 (nuc.)
Previous locus YALI0E29293g Next locus YALI0E29315g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29307g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29307gYALI0E29307g_mRNA-001YALI0E29307g_CDS-001

Nucleotide sequence

 

>YALI0E29307g
ATGGGCCAGTCCCCTTCCAAAAATGCAAACTCGACCTCCTCTCTGACAACTACTAACGGC
CAGGCCTCTGGGGCCGGTCTAGGCGTCATATCCGACGAGGGAGGCGACGACCCCAGTAGT
AGTGGGTGTAGTGGCACGAGCGCCCACAACAAGACACCTCACCACCAAAAGAGCTCATCA
TCCTCAACTCGACCCCCGACTGGACGAAGCCGCTCGTCCAAGTCCTCGACTGGAGGCTCT
CGCAAGGAGCGAACCTCCATGTCCTTTGATCACGACTTTTCCATCGACAACGCTTCTGCA
GCCGACTTCATGAGCAAACCCAAGCGAAGAGTATCGTCAGGGGCTTCGAAGTCCGCCAAG
ACTGATATGCGACATGACCCCACAGGTTCCGAGCGTAAGTCTCGCAGAGACAAGGCAGAG
GAAGCAGGGCTCGTAGCAGCCATGGGCGAGGTGGTCATTTCCCGACCTCATGACTCGCAG
TCATCGTCGGACACGGATAACGCCTCACTTGCCTCCACCAATTCTGAGGGCTCGACTTCG
TCACTCACCGCACCAGTTGCTCCCATTCAAAACTCAAACTCTGAACCTGGCACAGCCCCC
GGAGCACATACCGAACCCATTTCGATACCAGGTAATAATGACTCCTTAGCGCACTCGAAG
TTCCTTTCTGCCAAAAGAACTCCCGCCACCACCCTCCCCCCTCCAGGCTCGTCGGGCCCT
GTCGCCACTCCTGTCATTGCTGTTTCTCACCACGACAACAACGGATCACTCACCTCGAAT
GTAACCTCCGAGGGATCTCTTTCCGCCATTTCTATTGCGTCTTCCTCGGCCACCTCGAAC
GCATCCCCCGAGAACGCTGACAAGTCCAAAATGAGCCCCCAGTCTTCTCAGTCTTCCTCC
TCTTCCGAAGAGGATCTTTCCGATCTCTCCGGCCTCAAGTCTCCCATTCCCACCACCCAC
ATTGGCTCCTCTCGAGCTAACGCCGTGGCTCTGTCCTCCAAGCCCTCTGCTTCAACCCCC
CAGCGTGTCGACCTTCCTGCTGGCTACCAGTCGTCATTGAGTGTGTCTGTTGATAGTGTC
ACCGGATCCCCCGCACGAAACATCAAGAACCCTAAAATTGAGCCTGCTGTGTCGGGAGCT
TCGGTTGCGTCCACAGCCTCCAGCAAGAAGGCTACCAAGAAACAGCCTTTGCCCTTTGAT
GTCAACGATTTCATCAAGCGACTTCTCGATGCTGGAGGAAAATCTGGAGGAGCTGCCCCC
GTGCCCCTGCGACCAAACGAGATTGTCCAGCTCTGTGCTGCGGCTCGAACCGTGTTCATG
AGCCAGCCTGTTCTGCTGGAGCTCGGTACACCCGTCAAGGTTGTCGGAGATATCCATGGT
CAGTTTGGAGACCTTATTCGAATCTTTCAAATGTCTGGTTTCCCTCCAAAGACCAACTAC
CTATTCCTTGGTGACTACGTTGATCGAGGACGACAGTCTCTGGAGACCATCCTTCTGCTC
TTCTGCTTCAAGGTCAAATACCCCGAGAACTTCTTCATGCTGCGAGGTAACCATGAGTGT
GCCTCCATCACCAAGGTTTATGGTTTCTACGACGAATGCAAGCGTCGAGCTACGACCAAG
ATTTGGAAGTCGTTTGTCGATACGTTCAACACGCTTCCTATTGCGGCTACTATCGGCGGC
AAGATATTTTGTGTTCATGGTGGTCTGTCTCCTTACCTCAACTCCATGGACGACATCCGA
AAGATCACTCGACCCACCAACGTCCCTGATGTTGGTCTCTTGTCTGATCTCTTGTGGTCT
GACCCTGAGAGGTCTATCATGGAGTGGAGCGAGAACGACCGCGGTGTGTCGTATTGCTTT
GGACGATCTGTTGTCAACAAATTCTGCACAAAGTTCAAATTTGATTTAGTGTGCCGAGCT
CACATGGTTGTGCAGGACGGATACGAGTTCTTCAACAAGCGAAAGCTTGTCACCGTGTTC
TCCGCTCCCAACTATTGTGGAGAGTTCGACAACTGGGGAGCTGTCATGTGCGTGTCCAAG
CAGCTCCTTTGTTCTTTTGAGCTACTGAAGCCCATGGACTCCGCCTCTATCAAGGATGCC
GTACGAAGGGGCATCAAAAAGACTCAAAAGGTCAAGCTTGGTGAGTCTTAGGTTCCTCTG
TTTGTTACTGCGAGAACCTAGAGTTAATTGAGAAATTCAAAGTGGCACGCTCGAGTCCAG
TTTAGTCCAGACACAGCCCGCCCTATTTCTGTCATACATTCCATAGAAAGTAAAAAATGT
TCATGTGATATCCTCCGTGAGGTTTCACTGGCGGTTTAGGATTAGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29307g_CDS-001

Protein length: 717 aa.
Product: Serine/threonine protein phosphatase Z, isoform of Ppz2p, putative

>YALI0E29307g_CDS-001 MGQSPSKNANSTSSLTTTNGQASGAGLGVISDEGGDDPSSSGCSGTSAHNKTPHHQKSSS
SSTRPPTGRSRSSKSSTGGSRKERTSMSFDHDFSIDNASAADFMSKPKRRVSSGASKSAK
TDMRHDPTGSERKSRRDKAEEAGLVAAMGEVVISRPHDSQSSSDTDNASLASTNSEGSTS
SLTAPVAPIQNSNSEPGTAPGAHTEPISIPGNNDSLAHSKFLSAKRTPATTLPPPGSSGP
VATPVIAVSHHDNNGSLTSNVTSEGSLSAISIASSSATSNASPENADKSKMSPQSSQSSS
SSEEDLSDLSGLKSPIPTTHIGSSRANAVALSSKPSASTPQRVDLPAGYQSSLSVSVDSV
TGSPARNIKNPKIEPAVSGASVASTASSKKATKKQPLPFDVNDFIKRLLDAGGKSGGAAP
VPLRPNEIVQLCAAARTVFMSQPVLLELGTPVKVVGDIHGQFGDLIRIFQMSGFPPKTNY
LFLGDYVDRGRQSLETILLLFCFKVKYPENFFMLRGNHECASITKVYGFYDECKRRATTK
IWKSFVDTFNTLPIAATIGGKIFCVHGGLSPYLNSMDDIRKITRPTNVPDVGLLSDLLWS
DPERSIMEWSENDRGVSYCFGRSVVNKFCTKFKFDLVCRAHMVVQDGYEFFNKRKLVTVF
SAPNYCGEFDNWGAVMCVSKQLLCSFELLKPMDSASIKDAVRRGIKKTQKVKLGES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG