YALI0E29249g

Overview

Description similar to uniprot|P18759 Saccharomyces cerevisiae YBR080C SEC18 ATPase required for the release of Sec17p during the 'priming' step in homotypic vacuole fusion and for ER to Golgi transport
Locus type CDS
Locus tag YALI0E29249g

Location

Species Yarrowia lipolytica Positions 3458374..3460848
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2475 (nuc.)
Previous locus YALI0E29227g Next locus YALI0E29271g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E29249g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E29249gYALI0E29249g_mRNA-001YALI0E29249g_CDS-001

Nucleotide sequence

 

>YALI0E29249g
ATGTTCGGTTTTGGCAAAAAGGACAATCAGAATCCATACCGGGTTCCTGAACAACACTCT
CCTACTCACTCCGGATCCAATTCCCCCCGAACAATGAACAACCCTGGTCTTCCTAGACGG
GCACCTACTCAGGGACAGCCCATGCCTCCTCATCACCAGACCCCTCCTCCTCAGCAGCAC
AGACAACCTCCTTCCGGTCACGGTGGCGATATGATTCTGGGAGTGGGCAAGGACAAGGCG
TTTGCCCTGGCCAACCTCCTCGAAGTGCCCCCTGGAACCTTTGCTGACGGAGACTACGTC
ATTATCAACAACCAGCACGTCTTCACCGTGCGACAGTCGCCACATGCTGCTCCCGGCCAG
ATCCTTGCCGGAGCAGTGCAGCGACGATGGGCAGCTCTCAGCACAAACATGACTGTCCAT
GTGGCACCTTACGACCCCTTCCACAAGACACAGCAGGTGTATCTGGGCAACCTGGAGCTG
GAAATCGACTTCCTGTCTGCCAGTGCGGCCAGCGGAGCTGGATCCCGATCCTTTGAGCCC
GAAAAGCTCGCTCACCACTTCCTGCACCAGTACGCTAACCAGATCTTCACCCCTGGACAG
ACCCTGGCTATGGACTTCGAGGGCCTCAATTTCCAGATCAGAGTGCTCTCTACCTCGGTG
GTCAATCTGGGAGACGCTGGCGGAGTGGCTGCCCGAAACGTCCGAGGTATTCTCGTTCGA
CACACCGATATCGGTTTCAACAAGGCCAAGGGATCGGCCATGAACCTCAAGAGCGCCAAG
AACAAACCCCGACAGAACGCTATCATTCAGCCCGACTTCAAATTCCAGGATCTCGGTATT
GGTGGTCTTGATGCCCAGTTTGGTAACATCTTCCGACGAGCCTTCGCTTCTCGAATCTAC
TCTCCTGCCGATGTCGAGGCCCTTGGTATCAACCACGTGAAGGGTATCTTGTTGTTCGGA
CCTCCCGGTACAGGTAAGACTCTAATCGCCCGACAAATTGGTAAGATGCTCAACGCTCGA
GAACCCAAGATTGTCAACGGTCCCGAAATCCTAAACAAGTACGTTGGTGCTTCCGAAGAG
AACATTCGAAACTTGTTCAAGGACGCCGAGGCGGAGTACCGAGAGAAGGGCGATGACTCC
GGTCTTCACATCATCATTTTCGATGAGTTGGATGCTGTCTTCAAACAGCGAGGCTCCACC
GGTGGAGGTACCGGTGTTGGAGACAACGTCGTCAACCAGCTGCTCGCTAAGATGGACGGT
GTGGAGCAGCTCAATAACATTCTGGTTATCGGTATGACCAACCGAAAGGATCTGATTGAT
TCTGCTCTGATGCGACCTGGTCGATTCGAGGTCCAGATTGAGATTCCCCTTCCTGATGAG
GCTGGCCGTCTGCAAATTCTCAAGATTCACACCGCGCCTATGACTGCTGCAGGAAAGTTG
GGCAGAGATGTGGATCTTAACGAGCTTGCTGGAGAGACTAAGAACTACTCTGGTGCCGAA
ATTAAGGGTCTGCTTAACTCTGCTGCTTCTTATGCATTCACTCGAAACCTCAAGTTGGAC
CAAGGTGGAGGAGGCGTGCGACAGGAGAAGGGCGGAGAGCTCATGCTAATGCGGGACGAC
TTTGTGCATGCCCTCCAGGAAGTGCGTCCCGCGTTTGGTGTCTCCGAAGAGGATCTCGAT
GCTGCCGTCTCTGGTGGTATCATCAAGTACTCTCCCAACATTGATGACATTCTCAAGAAG
GGAGAGCTATTTATTGAGCGAGTTCGACAGTCTTCTGGCGACCGTGCTCTGGCTTCTCTG
CTGCTTCACGGCCCTGCTGGCTCTGGTAAGACTGCTCTCGCAGCTTCCATTGCCATGCAG
TCGAACTTCCCCTTCGTGCGACTCATCTCTCCCGAAGGCTATGTTGGTATGTCCGAGGCA
TCTAAGATCACTGCCATTCAGAACTGTTTCCTGGATGCTTACAAGTCTCCTCTGTCCGTC
ATTGTGATTGACTCTATTGAGATCATTCTCGAGTGGGTCCAGATTGGACCCCGGTTCTCA
AACTCTCTGCTGCAGGCCGTCAAGACTCTGTGTCGAAAGACTCCTCCCAAGGGCTGCCGA
TTGCTAATTCTGGTTACTACTCATGAGCGACACGTTCTTGAGCAGATGGATCTGATTTCC
GCGTTTGACTCCGAGATTGGCGTACCTTACCTACAGTCTCTCAAGGAGCTCAACAAGGTA
CTGGACGCTATGCAGTTCTTGGACTCTCCCGAGGCTCGACACCGGGTTGTACAGTCCATC
GAGGCCAAGACTGGATCTACCGTGCCTTCCATTGGTATCAAGACTCTGCTGTCTGGTCTC
AAGACTGCCCAGTACTCTTCAGATGTTGAGGAGGAGTTTGTCGATTTTATGGTTGACCAT
ATAAACGCCCGACGAAACAAGTATGTTTAACGAATCACGATTAGAATAGAATACATGAGA
TTGAAATGATGGGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E29249g_CDS-001

Protein length: 810 aa.
Product: AAA ATPase and SNARE disassembly chaperone, putative

>YALI0E29249g_CDS-001 MFGFGKKDNQNPYRVPEQHSPTHSGSNSPRTMNNPGLPRRAPTQGQPMPPHHQTPPPQQH
RQPPSGHGGDMILGVGKDKAFALANLLEVPPGTFADGDYVIINNQHVFTVRQSPHAAPGQ
ILAGAVQRRWAALSTNMTVHVAPYDPFHKTQQVYLGNLELEIDFLSASAASGAGSRSFEP
EKLAHHFLHQYANQIFTPGQTLAMDFEGLNFQIRVLSTSVVNLGDAGGVAARNVRGILVR
HTDIGFNKAKGSAMNLKSAKNKPRQNAIIQPDFKFQDLGIGGLDAQFGNIFRRAFASRIY
SPADVEALGINHVKGILLFGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGASEE
NIRNLFKDAEAEYREKGDDSGLHIIIFDELDAVFKQRGSTGGGTGVGDNVVNQLLAKMDG
VEQLNNILVIGMTNRKDLIDSALMRPGRFEVQIEIPLPDEAGRLQILKIHTAPMTAAGKL
GRDVDLNELAGETKNYSGAEIKGLLNSAASYAFTRNLKLDQGGGGVRQEKGGELMLMRDD
FVHALQEVRPAFGVSEEDLDAAVSGGIIKYSPNIDDILKKGELFIERVRQSSGDRALASL
LLHGPAGSGKTALAASIAMQSNFPFVRLISPEGYVGMSEASKITAIQNCFLDAYKSPLSV
IVIDSIEIILEWVQIGPRFSNSLLQAVKTLCRKTPPKGCRLLILVTTHERHVLEQMDLIS
AFDSEIGVPYLQSLKELNKVLDAMQFLDSPEARHRVVQSIEAKTGSTVPSIGIKTLLSGL
KTAQYSSDVEEEFVDFMVDHINARRNKYV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG