YALI0E28371g

Overview

Description similar to uniprot|P46675 Saccharomyces cerevisiae YLR045c STU2 suppressor of a cs tubulin mutation
Locus type CDS
Locus tag YALI0E28371g

Location

Species Yarrowia lipolytica Positions 3355917..3358720
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2804 (nuc.)
Previous locus YALI0E28358g Next locus YALI0E28402g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28371g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28371gYALI0E28371g_mRNA-001YALI0E28371g_CDS-001

Nucleotide sequence

 

>YALI0E28371g
ATGAGTGAAGAAGAAGATTTTAATGCGATTCCGGTGATGGACCGAATGGTCCACAAGGTG
AGTATCACGTGTTTTCCCCTTCCCAAACCCCGCGTTACTAATTCAGAACTGGAAAGCGCG
ACAATCAGCTTATGAAGAGTTGAAGGACAAGTTCACGACATCTCCAAGCGAAGCGGACCC
CATTTTCGCGCCTTTCCTCGACAACCCTGGGCTGTACAAGAAGATTGTCGGTGACACGAA
CGTGGTTGCTCAGGATCAAGGTATTCAATCTTTGGCAGCCTTCCTTCAGTTTGGAGGTAC
CCAGGCTTGTTTGAGAACACGGTCTGTAGTGGTTCCTATTCTTGCTGAAAAGGGACTAGC
TTCCGCACGAGCAGGCACAAAAACTTCTTCTACAGAATCCCTGTTATGGTACATTGAACT
GGACGTCCCTGATCCTGTTGTGGAGGATGTTGTTGCTTTGTTGGGCCATAGAACACCCAA
GGTGATCGCTGCCAACCTGAAGTGTTTGGTGGACATGGTCGCAGCATTTGGAAAGACAAT
CGACCCTAAGCCCGTGTTCAAGGCTCTTCCTAAGCTGCTTACTCATGCAGACAAGAATGT
GCGAGCAGAGGCGATGAACTTCATTGTTGAGGTTCAAAAGTGGCATGGTCAGCCTCTGAT
GGACGCAATTTTGCCCAGCTGGAACCTCAAACCTGTACAGCAGAAGGAACTCGATGAGAA
GTTTGCTGCTAACGCAGCTGCTGGAAAACCTACCCAAGCTCGACTTCTCAGATCTCAACA
ACAGGTGCTTTCTACAGCTTCGGCCAACGGAATCGAGTCCGACGAGATGGATGTGGACAA
TGGGGGTGATGAGGAGGATTCGGACCCTCTGGCTCTGGTGGAAGCCAAGGATGTGCTGTC
TCAGGTTCCAGCAAACTTTTACACAGAAGTTACATCAGCCAAGTGGAAGGAACGAAAGGA
GGGGTTGGAGGCAGTTCTACCTGTACTTCAGAGCGGAGGCCCCAAATTACAGGAGGGAGA
CTACGGAGAACTTCTCAGAGCTATGGCTAAGGTGGTTCACAAGGATGCCAACGTGCAATG
TGTGCAGGTGGCTGCTCAGTGTATCGAGACAGTGGCGAATGGGTTGCCCGGTAACGCGTT
TGCACGATACCGATTCACTCTCCAAGCTGTTCTGGAGCGAACGAAGGAGAAAAAAGCTTC
TGTGGCTGAAGCACTGGGCAAAGCTCTCGATGCTATTGCTTGCAAGCTCCCCTTTGGCGA
GGTGGTGGAAGATACATTGCCGTTCGTGTCCCATAAGACTCCCCAGGTGCGGATTGAGTC
TCTGAACTTCATTCTGCGTCTTTTGTCGACTATCAAGGAGTATCCTAGTGACCAGGACTT
GGATCATGTGATCAAGGCGGTTCTGAAGACACTTTCTGATACCCAGGCTCCTGTCCGAGA
GATTTCCATGCAGGTTCTTGGTACTGCTCGAAAGCTGATTGGAGAACGGGCCTTTGAGCA
GCATTTCAAGGGCGTTGACGATATCCGAAAGACGAAAATCGTCGAGTACTACGATAAGGC
AACAGTGGTGGCTAGGCCCAAGGCCAAGCCTACCCCAAAGCCTGCTACTCGCGCTCCTCC
TCCTTCTGCCTCTGCTTCTGCATCTAACAAACGTCCTTCTGTGGCTACTCCTGGTCAACG
GAAACTGGTTCGACCCGGTGGAGGTGTTATTCGAAAGCCCTTTACTGGATCCAATGCCGG
TCCTTCTTCTGGATTTGGATCTACCGACAGCAAGCCAGTTCAGTCATCTGGATATGGTCA
GTCTTCAGGATACGGCCAATCTCGAACTGGGTTGATGAAGCAACCTCTCAAGAAGATTCC
TGCAAGCCCGAGTATCGACTCTTTCGGACCAGCAGCTTCCTCAGCAGATATTGAGGAACT
AGAGGAGCTGAGAGCCGCTAAGGAAACTTGGATCAAGGAGAAGGAGACATTGATGGCTGC
TTTTGAGGCCGAAAAGCAAAAGTTTGCAGCTGAGAAGCAGAGATTGCTTGACGAGATCAA
CTCTCTGCAACATTCCAAGGCAGACATTCTAGAACAACACACCAAAGACGCTGTTTCGTT
CAAGAGCAAAGAGACACAGTTCTCCCGGATGCAGGGGGATTTGCAGGCTGCTTACAAGCG
GATTTCTGAGCTGGAAACTGCTGCTTCTGCTTCTCAGGCTGTGAAGCAAGAACCCCGAGA
GATGTCACCCTCTGTTGACGCTGAGGCATCGTTCAGAGAGCTGTCGTTGGGTGGGGAAGG
AGGAGGGAGTGAGAGAGTTGGAGGAGACAGACGAATATCACGTGACTTAAGCGGAGGAAA
CAACTTTAATGCGGGAAGCAACGGCACGCGTGAATTCAGGCCTGGTCATGGAGGTAACAG
CGGCTCACGTGACTTTGGTGTCGGTAACCGGGGCTCTCGGGACTTCGGTGTTGGGAACGG
ATCACGTGACTACTTGGGAGGAAACGGACATGACTACGGTACACGTGAGTCGGCGGTGTC
ACGTGCCCTATCTCCTGACAGACGGGATTCATATAGACCTCAGGCTCAGGAGTCGTGGCA
GCGTGCTGCAGAGGTTACTAATCAGTTGAAGGCTCGAATCGAGGCCATGAAGGCGAGACA
GAAGATGTACTAGTACTGGATTTGATAATTCTAGGGTTGGAAGCTGATACCAGGAGAATG
ATGATGAATGGCAATGTTCATGTAGGAAAATGGTTAACACTTAATGGCTGGTTTTGATGT
GTAGAGCTCGCGGACTGAATAAAATACATTGATATTGACTATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28371g_CDS-001

Protein length: 868 aa.
Product: Microtubule-associated protein (MAP) of the XMAP215/Dis1 family, putative

>YALI0E28371g_CDS-001 MSEEEDFNAIPVMDRMVHKNWKARQSAYEELKDKFTTSPSEADPIFAPFLDNPGLYKKIV
GDTNVVAQDQGIQSLAAFLQFGGTQACLRTRSVVVPILAEKGLASARAGTKTSSTESLLW
YIELDVPDPVVEDVVALLGHRTPKVIAANLKCLVDMVAAFGKTIDPKPVFKALPKLLTHA
DKNVRAEAMNFIVEVQKWHGQPLMDAILPSWNLKPVQQKELDEKFAANAAAGKPTQARLL
RSQQQVLSTASANGIESDEMDVDNGGDEEDSDPLALVEAKDVLSQVPANFYTEVTSAKWK
ERKEGLEAVLPVLQSGGPKLQEGDYGELLRAMAKVVHKDANVQCVQVAAQCIETVANGLP
GNAFARYRFTLQAVLERTKEKKASVAEALGKALDAIACKLPFGEVVEDTLPFVSHKTPQV
RIESLNFILRLLSTIKEYPSDQDLDHVIKAVLKTLSDTQAPVREISMQVLGTARKLIGER
AFEQHFKGVDDIRKTKIVEYYDKATVVARPKAKPTPKPATRAPPPSASASASNKRPSVAT
PGQRKLVRPGGGVIRKPFTGSNAGPSSGFGSTDSKPVQSSGYGQSSGYGQSRTGLMKQPL
KKIPASPSIDSFGPAASSADIEELEELRAAKETWIKEKETLMAAFEAEKQKFAAEKQRLL
DEINSLQHSKADILEQHTKDAVSFKSKETQFSRMQGDLQAAYKRISELETAASASQAVKQ
EPREMSPSVDAEASFRELSLGGEGGGSERVGGDRRISRDLSGGNNFNAGSNGTREFRPGH
GGNSGSRDFGVGNRGSRDFGVGNGSRDYLGGNGHDYGTRESAVSRALSPDRRDSYRPQAQ
ESWQRAAEVTNQLKARIEAMKARQKMY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG