YALI0E28358g

Overview

Description similar to uniprot|Q5B4V2 Aspergillus nidulans hypothetical protein AN4428.2
Locus type CDS
Locus tag YALI0E28358g

Location

Species Yarrowia lipolytica Positions 3354405..3355954
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1550 (nuc.)
Previous locus YALI0E28336g Next locus YALI0E28371g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28358g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28358gYALI0E28358g_mRNA-001YALI0E28358g_CDS-001

Nucleotide sequence

 

>YALI0E28358g
ATGTCGGATCAAAATCACGTCGAGCTGGAAAGCTTGGCAGAATCGGACGACTACCAGGTT
GAAAGCGACAACGACGATGGCGGACACGTTACCCAGACGTTACTGGGCAACAATCCCGGG
TTAGCCGAGGTCACGGCTGAATCTGAGAAGTCCAACATGAAAATGGCATTTATGAACATG
GCCAACTCGATTATCGGCGCCGGAATCATCGGCCAGCCCTACGCCGTGCATGAGAGTGGT
CTTATTGCGGGAATCCTGCTACTGGTTGGTCTGACGTTCCTGATCGACTGGACGATTCGA
CTCATCGTGGTCAACGCCAAGTTGTCAGGTACAGACACGTATCAAGCCACCTGCCGCAAA
TGTTTTGGTAAGACCGGTCTCATTGCCATCTCTCTGGCCCAGGGCTGCTTTGCATTTGGT
GGATCGATCGCGTTCTGTGTCATTATCGGAGACACTATTCCGCATGTTCTGGGAGCACTT
TTCCCGTCTCTTCTGGGTGGTGAGGACTCGGGACCTTCGATCCTCGTCAACAGACAGTTT
ATTATTGTTATTTGCACGTGTCTGATCTCTTATCCGTTGGCTCTGAACAGAAATATTGCC
CATTTGGCCAAGGCCTCGGCTTTGGCTTTGGTATCCATGCTGGTCATTGTCATTCTTGTG
ATTGTCCGAGGACCCCAGCTTGCTCCTGAGTACAAGGGCACTTTTGATGGACACGCTCTG
AGTATCAGCCCGGGACTGTTTCAGGGAGTGTCAGTCATCTCTTTCGCCTTTGTCTGTCAC
CACAACTCTCTGCTGATCTACGACTCTCTGAAACGACCTACTATGGATAGATTCGCTACA
GTTACCCACTGGTCTACCGGAGTCTCCATGGTGGCTTGTCTGGCCATGGGAGTGGGTGGG
TTCGTCATTTTCGTCGACAAGACCAAGGGAAACGTTCTCAACAACTTCCCAGCCTCTGAT
GTCATGGCCAACGTTGCGCGATTCTGTTTTGGCTTCAACATGCTCACCACCCTGCCTCTG
GAGATCTTCGTTTGCAGAGAAGTCTTCACTACATACTTTTGGCCTGGCGATGAGTTCAAG
TGGATTAGACACATTGTTACTACCACGGTGATGATGCTCACCGCCATGTGTGTTGCTCTG
ATCACCTGTAACCTGGGTGTTATTCTAGAACTCGTCGGAGCTACCTCAGCTTGCGTCATG
GCATATATCCTGCCTCCCCTGTGCTATTTGAAGCTGACCAAGAACAAGAGTCTAAAACAG
AAGGCTCCTTACTATCTGGTGGCAGGATTTGGAGTGCTAGTCATGCTCTTCTCCACCATC
CAATCACTGCTGAAGATTGTGAATGGAGAGGAAGAGGGCAGTCATTGTGACGTGAACTAG
TCCTAATATGACCAATTATTGTCCCCTACGGGTACTTGCACTGCACGACCACTCAAAACA
TCCAAAACAAACCAATCAGACCTAACCATATATCCGCCGTCTGATCACATACAGACAACA
CCAAAATCACTAAAATAGTCAATATCAATGTATTTTATTCAGTCCGCGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28358g_CDS-001

Protein length: 460 aa.
Product: Conserved hypothetical protein

>YALI0E28358g_CDS-001 MSDQNHVELESLAESDDYQVESDNDDGGHVTQTLLGNNPGLAEVTAESEKSNMKMAFMNM
ANSIIGAGIIGQPYAVHESGLIAGILLLVGLTFLIDWTIRLIVVNAKLSGTDTYQATCRK
CFGKTGLIAISLAQGCFAFGGSIAFCVIIGDTIPHVLGALFPSLLGGEDSGPSILVNRQF
IIVICTCLISYPLALNRNIAHLAKASALALVSMLVIVILVIVRGPQLAPEYKGTFDGHAL
SISPGLFQGVSVISFAFVCHHNSLLIYDSLKRPTMDRFATVTHWSTGVSMVACLAMGVGG
FVIFVDKTKGNVLNNFPASDVMANVARFCFGFNMLTTLPLEIFVCREVFTTYFWPGDEFK
WIRHIVTTTVMMLTAMCVALITCNLGVILELVGATSACVMAYILPPLCYLKLTKNKSLKQ
KAPYYLVAGFGVLVMLFSTIQSLLKIVNGEEEGSHCDVN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG