YALI0E28402g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E28402g

Location

Species Yarrowia lipolytica Positions 3359920..3362082
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2163 (nuc.)
Previous locus YALI0E28371g Next locus YALI0E28424g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E28402g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E28402gYALI0E28402g_mRNA-001YALI0E28402g_CDS-001

Nucleotide sequence

 

>YALI0E28402g
ATGCATCTTCATTTTTTCCTAGGACTGGCTACCACAGCCTGGGCCATGTATGAATACAAC
GAGATCATCCCCTCTCGACATCGGGTTTGCAACCCCAACGAGCTGGGCTTGGAAGACTAC
TATGGCTTTGTTGTTCACCATCAAGTGACCGTTTCATCTTGGCCCAATCTGCACCATACT
CGAGTATCCGAGTGTGAAAACTCGTATGTTCAGCAGCACGATTTGTACCATCCCAACGAG
CCCGGCCAAGATACTGTGTGGGGCAAGAAGTTGTGTTCCGTTCACAACAACGACCACACT
CGATGTTTCATGATGGCGCGAAGACGCCGATACGCCGGCCTCAAGTACTCTTTGTTCGTC
CCCAACATGTGGATTGGTACTCTGTTTGAGTGTGACTGGAGAAACCCCAAGGACCCAGAG
TGTATCAACCCAATCCCCATGCGACCTCTCATCTCCGACAATCTGGTATTAGCCAACTGG
TACGAGACCCCTGATGGTTTCAAGCACATGGTTCGACGAATCCCGATGTTCTACACCACC
AACAAGGGCCATCCCGTTCCTGCAAACTGGAACAACTCAGTAGATCCCTGGGAGCAGTAC
ACTTACAGCTCCAACGAGGAAAGTGTCTTCAGCAACGTCGCAACCAATCTGCAGTCCTGG
TTCCACACTCTGAATCGTATTGGACAGCAGGAACCACTTGACATCGATGAGGGGGATGGA
CGACCCCGACGAGGTCTTTCCGCTCCTATCGACTTGTCGTACAAGAACGCCTTCCATTGT
TGGGATGATGTTCGTAACGTGTTCTGGAAGTGTCCCCCTCCCAAGTGGAAGGAAGAGATT
GATGCTGAGAAGCGAAAGAAACCTGACTACCATAACAGACTCATTATGCCTATGCCCATG
CCTCCTCTTGATCCCCCTCGAGAGCCCAACGACTTTGATGATCCCTTGGGTCTTCCTAAG
TCTCGACTTCCCGAGTTCCGAGATATTCCCGGAATTATCGATCGAGGTAGAGACGCGTAT
GATCCCTTCTACGATCCCGTTTTTGAGAAAGAGAGAGCAGAATGGCATAAAAATAACCCA
GCTACTACATACCCTGTCATGACTGCTGAGCTCCCTATTTCCACAGTGGGTCCCTCCAAC
CCTCTCAAGCACTCATTCAATATCTTTTCTGGACTGTTCAAGCCTCGTCCTGTCATCAAG
GAGGAAGAGGAGCTGGAGGAGGAAACTTGGGGCTTCTTTGATATATTCCAGCCCAAACCT
CGACGAGGACAATCCAGTATTGGTCTCATGGACAAAATTCTGTACGGAAATCTGCCTCCT
GCTGCACGTCCTGGAGGAGCTCAGACAAGTTACACAGGTGGATACCGAACCTATGATCAG
AATATCGGAAGTCTAGTACCTGTTATCCGACCCACAACCACTCAACGAAAGCCTGGTGAG
TTCGATTTCACTCCTCTCCCCATGGAGGATTGGATCTCTCTTTTTACCCATGACTCCAAA
GCTCCCGGCACTCCGGTAACTACTAGTCTTTCTGTCAAAACTGCTACTACCTCTGTTGCT
TCTACGGTGTCTTCCAACAACACTATGCCCATGGTCACTCTTTACAAGGCCAAAAAGTCT
GCGCGCGTCCACAGTCCAACCACCACCGCTTCTCAGTCTTACGAGGAGATTCGATGGAGC
AAGGAGATGGAGCGTCGAAAGAAGGAGTATGAGGAATATAGACGACAGTTTGGTCCAGGC
TACGAAGAGCTGCCCCCTAACAGTGGCCACGAGTGGACGGAATATTCTTCTTTTATTGAT
CACAACAGGAAGACGTTTGCTCGCAAGGAACAACGCCAGAAGGAGATTGAAGAGATGAAG
ACTCGGAATCGACAGAAGCGAGACGATCTTGATGAAAAACAGTTCTTCCTCGATGAGCCT
GTCTCTGTGGGTGAGGGACCTATCTTCTATTCGGTTCCTGCTGCCGACCAGACCCTCAAT
GTGACTGTTCCCTCGGTTGAGGATCTTAAGAATCCAGCTATGATTCAGCGACGCTCGTTG
TCTTCTCGGCTGGAAATCACTCTCACTGATATGATCGACACATTTGATGCCGTTGGTGAG
AAGAAGTATCGACAGCTGATGAAGAACGTCCTCAGTGCTTTAGAAAGTATCGAGGATGTT
TAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E28402g_CDS-001

Protein length: 721 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E28402g_CDS-001 MHLHFFLGLATTAWAMYEYNEIIPSRHRVCNPNELGLEDYYGFVVHHQVTVSSWPNLHHT
RVSECENSYVQQHDLYHPNEPGQDTVWGKKLCSVHNNDHTRCFMMARRRRYAGLKYSLFV
PNMWIGTLFECDWRNPKDPECINPIPMRPLISDNLVLANWYETPDGFKHMVRRIPMFYTT
NKGHPVPANWNNSVDPWEQYTYSSNEESVFSNVATNLQSWFHTLNRIGQQEPLDIDEGDG
RPRRGLSAPIDLSYKNAFHCWDDVRNVFWKCPPPKWKEEIDAEKRKKPDYHNRLIMPMPM
PPLDPPREPNDFDDPLGLPKSRLPEFRDIPGIIDRGRDAYDPFYDPVFEKERAEWHKNNP
ATTYPVMTAELPISTVGPSNPLKHSFNIFSGLFKPRPVIKEEEELEEETWGFFDIFQPKP
RRGQSSIGLMDKILYGNLPPAARPGGAQTSYTGGYRTYDQNIGSLVPVIRPTTTQRKPGE
FDFTPLPMEDWISLFTHDSKAPGTPVTTSLSVKTATTSVASTVSSNNTMPMVTLYKAKKS
ARVHSPTTTASQSYEEIRWSKEMERRKKEYEEYRRQFGPGYEELPPNSGHEWTEYSSFID
HNRKTFARKEQRQKEIEEMKTRNRQKRDDLDEKQFFLDEPVSVGEGPIFYSVPAADQTLN
VTVPSVEDLKNPAMIQRRSLSSRLEITLTDMIDTFDAVGEKKYRQLMKNVLSALESIEDV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG