YALI0E27918g - BUD6

Overview

Description uniprot|Q6C4C4 Yarrowia lipolytica YALI0E27918g BUD6 Actin-interacting protein
Locus type CDS
Gene name BUD6
Locus tag YALI0E27918g

Location

Species Yarrowia lipolytica Positions 3303389..3306014
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2626 (nuc.)
Previous locus YALI0E27896g Next locus YALI0E27940g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27918g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27918gYALI0E27918g_mRNA-001YALI0E27918g_CDS-001

Nucleotide sequence

 

>YALI0E27918g
ATGTCGTACCACGGTGGGCAGCACCCTCCGCCACCCATGGCGCACCCTCCGCATCACCAG
AGCCACAACCAGCAGGCTCCCACAGGCTCGTCAAGACGTCTGTCTGCTCAGACCCCCATG
GCCCGCAACTCGACTGCCATGAACTCCATTGAGTCCAGCGTCACCCATCTGCTGGTAGCA
ACCAAACAGCTGCTTGAGAGCCTCACGCAATGGGCCCGCGGAGCAGCCTCTGAACAGGAC
GTGTCCGACATCTACGTCAATCTGGGCAACGAGTTCAACATTGCCTGTCGAGCGTTTCTC
AACGCCGGCTTGCCCGTCACTGACATGGGCGATGTGCCCCAGGCGCTGCGGACGGTGCTA
GAAAAGGCGCTAAGCGAAGAAGCATCGCAGGAAAACCTCGATCTGTACCTGCCCAGCATT
CGGGAAATCATCATCAACCTGCTTCAGGGTCTGAAGAAGAAACAGGCTGCACTTAGAGCA
GCTCAAGGAGCACAGGCGCAACAGATCCCACCTCAACAATCACCCAAAAATTTCCGACCA
CACCCGCCCCAGCATCAATACGGACCCTCCAGACAGGTCTCAGCACCCACCTCTCTGCCA
CAGCACAAGGATGATAGAGACCATGTGCGACGGTCTCAAACTATAGGCTCAGCACCTAAG
CAGCCAGGATTACCCAGTCCACCGGTGGCCCGACAACCGCCGCAGCCACCGCATATGGCC
CCACCAGCTCACATGCCTCCTGGCATACCTGGAGCTATGGCTCAAGCCATGGCCCCTGCC
ATTCCCCAGGGCTCTCCGACCAGACGCCCGGGATCACGTGGAGACCCTCTGGCAGCTTTA
CAACGAGGAGAGGCGCTCGAAAGACGAGCATCCAGACGATTCTCGGCTTACCAATACGCC
AAACTTACCTCTGGAGCACCTGGAAAGGCCGTTCCAGACATGCCCATGTTGCCATCGACT
CCTCTTCCCGACGAGAGTGATTTAGGCGATGTGTCTACGGCTACAGATGTTGGAGGACCT
GGAATGTCTTTGTTTCTTAGACTTGGAAATGCTACCAAAAAGGTCAAGGCTGACTCGGAT
GTCAACATCAACGCTCTGAGACTCCTATTCATCTCCACATTCAACTACTCTCCTGGAGCA
GACGATTTCCCCAACATTTACATTCGTGACAAAAAATCTGGAGTGGAGTATGAGCTGGAA
GAGTCGCATCTGAGCGATATCCACGACGGAACTATGCTGGTGCTACATGAAGAGGAAGAG
AAGGAGAAGGAGAAGGAAAAAGAGAAGGAAAAAAGCGACGACATCCAGGGCATCTTGGAA
CATGTCAAGGCCATTACTTTTGCTCTGAACCAGCAGAGGGAAGAAATTGGAGACTTGAAG
CTTATGGTGGAGAAGAAACCTCCCTCGGCAGCAGTCGGTGCCGGTACACAAGGTCCCTCT
ATCGTTAAAGCAACGGAGCCCATTGTCAAGACTCCCGTCATTGCTCCTCCAGAAGTGTCA
CAGGCCAAACTGTCCACTATTGCGCCTGCTCCTGTTCCCACTCCTATTGCCGACAAAGAT
CTTCTCAAGGCCAAGGCTGCCGATATGCATGCATTGAAGCACGAGCTGGCTGTTATTCGA
CAGCTCAAGGACTCATCCTTCACTCTCTGGAAGACTTCAATGAAGGACATTTCCGACACC
ATTGGCAAGCTTCGAGACTACTCTTCTCTTCCCGCCGCTGGAGACAACTCTCGAGCCTTC
ATGGAAATGGCCAACAAGAAGGTCTCTACTGACTCAGATGCTCTTCTCACTCGAGCAGAC
GATCTCCAGGACGTTATTGAGGCTCTTAGAAAGGATGTCGCTCAGCGAGGCGTTCGGGCT
GAGCCCGGTCAGCTTGAAGTTGTCACCAAAGAGATGGAGACTTGTAACACCGAGCTCACC
GCTCTGGAGACTTACATCAACTCGCAAAAGTCCGTGTGGAAGAAGGTCTGGGAACGAGAA
CTGGAGACCATCTGCGAAGAGCAGCAGTTCTTCAAACTTCAGGAGGAGCTCATGGCCGAT
CTGCGAGAGGATTTGGCTTCTGCTGCATCTACTCTGGCTCTTGTTGAACAGTGTTCCAAC
GAGCAGCTTAAAAGTGCCGCCAAGAACAGTCACAAGGCCGTACTTCTCCCTGTTCCTACT
GAGTCCGTTCAGGATCTCAAGGAGGGAGTTCTTTCGTCTGTCCTTGCTCTGAAACCCGAC
CATGAGTCTCGAATCGAGGCTATTGAACGGTCTGAGCGGTTACGAAAGTTTGAACTTGAG
TCTAGAGTCGACAAGTTTGAAAAGGAGCTGGGCGAGTTTGTGGGAGAGAACAAGCTCAAG
CCCAGTGGAGGAGTTGCTGAGGCTGAGAAGCAGCGTCTTGAACGAGAACAGAGAGTGTGG
AGAGAGCAGTTTGGCTACGGAGGAGATGAGGATGATATTGATGACTTAGATGGAGAGCTC
CAGACTGCCAGTGAAGAGGAGACCGACGAGGAAGAGAGTGAAGCAGAGACCGACGAAGAC
GAGGAAGAGGAGGAGGGAAATTAGTAGACGTCAGACGAGAGAGACAGATAAAACGACAGA
TCGTTTCGCACAAAAGGATATAGTGAATGCATTGGTAGGATTATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27918g_CDS-001

Protein length: 848 aa.
Product: Actin-interacting protein
Gene: BUD6

>YALI0E27918g_CDS-001 MSYHGGQHPPPPMAHPPHHQSHNQQAPTGSSRRLSAQTPMARNSTAMNSIESSVTHLLVA
TKQLLESLTQWARGAASEQDVSDIYVNLGNEFNIACRAFLNAGLPVTDMGDVPQALRTVL
EKALSEEASQENLDLYLPSIREIIINLLQGLKKKQAALRAAQGAQAQQIPPQQSPKNFRP
HPPQHQYGPSRQVSAPTSLPQHKDDRDHVRRSQTIGSAPKQPGLPSPPVARQPPQPPHMA
PPAHMPPGIPGAMAQAMAPAIPQGSPTRRPGSRGDPLAALQRGEALERRASRRFSAYQYA
KLTSGAPGKAVPDMPMLPSTPLPDESDLGDVSTATDVGGPGMSLFLRLGNATKKVKADSD
VNINALRLLFISTFNYSPGADDFPNIYIRDKKSGVEYELEESHLSDIHDGTMLVLHEEEE
KEKEKEKEKEKSDDIQGILEHVKAITFALNQQREEIGDLKLMVEKKPPSAAVGAGTQGPS
IVKATEPIVKTPVIAPPEVSQAKLSTIAPAPVPTPIADKDLLKAKAADMHALKHELAVIR
QLKDSSFTLWKTSMKDISDTIGKLRDYSSLPAAGDNSRAFMEMANKKVSTDSDALLTRAD
DLQDVIEALRKDVAQRGVRAEPGQLEVVTKEMETCNTELTALETYINSQKSVWKKVWERE
LETICEEQQFFKLQEELMADLREDLASAASTLALVEQCSNEQLKSAAKNSHKAVLLPVPT
ESVQDLKEGVLSSVLALKPDHESRIEAIERSERLRKFELESRVDKFEKELGEFVGENKLK
PSGGVAEAEKQRLEREQRVWREQFGYGGDEDDIDDLDGELQTASEEETDEEESEAETDED
EEEEEGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG