YALI0E27896g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E27896g

Location

Species Yarrowia lipolytica Positions 3300474..3301342
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 869 (nuc.)
Previous locus YALI0E27874g Next locus YALI0E27918g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27896g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27896gYALI0E27896g_mRNA-001YALI0E27896g_CDS-001

Nucleotide sequence

 

>YALI0E27896g
ATGTCTCTCGCGCTGCCAACATACTCAATGGGTCTCAAGTCTGCTCTCAAGTCTCCCAAG
TCTCCCAAACCAACCTCAGCCAAGCGAGTCTCCTTCGACGCCTCCGCACACGATAACGAG
CCTCTGCCGTCGCCTTCTGCCTTCGACCAGCTTGCCTACCTCACCAAGGCTCCCGTTCCT
TACCAGGAGGAGCCACAGGGACTCAAGCTGTCTCTTGAACAGCTCAAGCCCATGAAGAAC
AAGGATATTTACGCCGTTCATCAGTTTGGCCACCAGACTCTTCCTATCCCCTACAACATT
GAATTCTACATGCAGTTCCTCTACTCGACGGGCACTTTCTGCTACTACCTCCCCTACGGC
GAGCTGGATCCCAACACTGAGGACCCCGAAGCTATTGCCGCTGTGGTGGCCGGAAAGTTC
TCCCACCAGCAGGCCAACTGCCATGTGTACATTCTGGCCGTTGCTCCCGGTCTCCAGCAG
TCCGGAGTTGGATCCGCCATCATGCGGGTGCTCCAGCAGACCATTTTCGACGAACAGCTC
AGCCGATACACCGCTCACACTCATCTCAACTTTGTGGTGGACGTGATCGCTGACGGAGCT
GATGTCGAGTCTCCCCAGGGTTTCTACGAGAAGCTTGGATTCCGAACCCAGGGAGCTCCT
CGACATGGATACTATGGAGGACAGTGGACTTCTGTTAAGATGGTCAAGTCTATTGACCTC
TAGGAAGTGACTGACAATGACTCCACTACAACACCAACTCATCTGAACTGCATACACTAA
CAACCACACGAGCATGATAACGACAATGACCTATTTATTGTACATAATTATATTTATTCG
AATTAATACTTGATATTTTGATGTGTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27896g_CDS-001

Protein length: 241 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E27896g_CDS-001 MSLALPTYSMGLKSALKSPKSPKPTSAKRVSFDASAHDNEPLPSPSAFDQLAYLTKAPVP
YQEEPQGLKLSLEQLKPMKNKDIYAVHQFGHQTLPIPYNIEFYMQFLYSTGTFCYYLPYG
ELDPNTEDPEAIAAVVAGKFSHQQANCHVYILAVAPGLQQSGVGSAIMRVLQQTIFDEQL
SRYTAHTHLNFVVDVIADGADVESPQGFYEKLGFRTQGAPRHGYYGGQWTSVKMVKSIDL
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG