YALI0E27940g

Overview

Description highly similar to uniprot|Q12522 Saccharomyces cerevisiae YPR016c TIF6 translation initiation factor 6 (eIF6)
Locus type CDS
Locus tag YALI0E27940g

Location

Species Yarrowia lipolytica Positions 3307268..3308220
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 953 (nuc.)
Previous locus YALI0E27918g Next locus YALI0E27962g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27940g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27940gYALI0E27940g_mRNA-001YALI0E27940g_CDS-001

Nucleotide sequence

 

>YALI0E27940g
ATGGCTACCCGTGCCCAGTTTGAAAACTCTGACGAGATTGGTGTCTTTTCCAAGCTCACC
AACTCCTACTGTCTGGTGGCTGTTGGCGGCTCCGAGAACTTCTACAGCTCTTTCGAGGCC
GAGCTCCAAGATACCATTCCTATTGTCTACTCCACCATTGGCGGCACCCGACTCGTGGGC
CGTCTCACAGCCGGCAACCGACGAGGTCTGCTTGTGCCCTCCACCACTTCGGATGTTGAG
CTGCAGCACCTGCGAAACTCCCTGCCCGACGAGGTCAAGATCCAGCGAGTTGAGGAGCGT
CTATCTGCTCTTGGAAACGTCATCTGTACCAACGACTACGCCGCTCTTGTGCATCCCGAT
ATCGAGCGAGAGACCGAAGAGCTGATTGCCGATGTGCTTGGTGTTGAGGTCTTCCGACAG
ACTGTTGCTGGAAATGTGCTTGTCGGCTCTTACTGTGCCCTGTCCAACCAGGGAGGTATT
GTCCACCCCCAGACCTCCATTGAGGACCAGGATGAGCTTTCTTCGCTTCTCCAGGTCCCC
CTGATTGCTGGATCCGTCAACCGAGGTTCTCCTGTTGTCGGCGCTGGCTGTGTTGTCAAC
GACTGGATGGCCGTTGCTGGTTACGCCACCACCTCTTTCGAGCTTACTGTCATGAGCAGT
ATATTCAAGCTCAACAACGACCAGCAGGGCGAGCAGTGGGAGCAGACCAAGTGGTCCCAG
CTGTACCAGCAGATGGGTTAAGCACAGCCAGTCTGCTTCTCCTCGTCAACACACTGGTGT
GCTGGCTGCAGTGCGAGCTCTACTCAACAGCGAGCATCGCTTAAACTATTATGCATTATG
TATTTGGCATGGCCTGACTTCAAAATATGGGTGTGTCTCCAACGGATCAGTATTCCTTTG
CATGGCACTATTCGCAGTTTTAATTAGATAGATAATACAAGCTGCCAAGGTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27940g_CDS-001

Protein length: 247 aa.
Product: Constituent of 66S pre-ribosomal particles, putative

>YALI0E27940g_CDS-001 MATRAQFENSDEIGVFSKLTNSYCLVAVGGSENFYSSFEAELQDTIPIVYSTIGGTRLVG
RLTAGNRRGLLVPSTTSDVELQHLRNSLPDEVKIQRVEERLSALGNVICTNDYAALVHPD
IERETEELIADVLGVEVFRQTVAGNVLVGSYCALSNQGGIVHPQTSIEDQDELSSLLQVP
LIAGSVNRGSPVVGAGCVVNDWMAVAGYATTSFELTVMSSIFKLNNDQQGEQWEQTKWSQ
LYQQMG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG