YALI0E27874g

Overview

Description some similarities with uniprot|P21373 Saccharomyces cerevisiae YJR049C (ohnolog of YEL041W) UTR1 associated with ferric reductase activity
Locus type CDS
Locus tag YALI0E27874g

Location

Species Yarrowia lipolytica Positions 3294406..3296624
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2219 (nuc.)
Previous locus YALI0E27852g Next locus YALI0E27896g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27874g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27874gYALI0E27874g_mRNA-001YALI0E27874g_CDS-001

Nucleotide sequence

 

>YALI0E27874g
ATGAGCACTCCGGTCAGCGAGTCTCCGTACGTGCACCAGCGGTTCGACGCTGCTCTCAGC
GCCGCCTCGGCCCTCCAGGAGCTCTCAGCTGAAGACATTCAGAGCTCACGACTCAGCCAT
GCTCACTTCGTCCAAACTGCGACAGGAGTTCGACGAATTGCCAAACATCTCGGCAAGGCC
TCCGTCCACATCGATGTGACTAAGGTCATGATCATCACCAAGGCCCGAGACAACTCGCTT
GTCTACCTGACCCGAGATATGGCCCGGTGGTTGATGGACCGAGGAGTGGTGGTCTATGTG
GATGCCAAACTCGAGAAGAGTGGCCGCTTCGACGCTCCTACACTGACTGCAAACACCCCA
GCACGTATGCTCAGATACTGGACTGCCGAAATGGCGACCCAGAAGCCCGAGCTCTTTGAT
CTAGTCATTACCCTGGGAGGAGACGGGACGGTTCTGTGGGCCTCGTGGCTTTTTCAAGGC
ACCGCTCCCCCCGTTATTCCCTTTGCGCTGGGTTCGCTCGGCTTCCTGACCAATTTTGAA
TACCATGACTTTGGCAAGCATCTTACAAAGGCCATGACTCAGGGAGTACATGTGCATCTG
AGAATGCGATTCACATGCACCGTGTTCAAGCGGGAAATGAACCCGGAAACCGGAAAGAGA
GATAAGCATCACTCCAAGATTGGCCGACACGAAGTTCTCAACGAAATTGTCGTCGATAGA
GGTCCTTCACCATTCATCTCAATGCTGGAGCTCTATGGGGATGATAACCTGTTGACCATC
GTACAGGCTGATGGCCTCATTCTATCGACTCCCACAGGATCCACGGCATACTCTTTGTCA
GCAGGAGGCTCTCTGGTTCACCCTGAGATTCCAGCCATCTGTGTGACTCCAATTTGTCCC
CATACCCTGTCCTTCAGACCCATGCTTCTGCCTGATTCAATGACACTCAAGGTGGTTGTT
CCTCGAAAGAACTCACGGACTTCAGCATGGGTCTCATTTGATGGCAGATCACGTGTGGAG
CTCAAGTCGGGCGACTACATCACAGTGCGAGCTTCAAAGTTTCCATTCCCCACCGTGATC
CGATCAGACATGGACTACATTGAGTCTGTGAGTCGAACACTCAAGTGGAACACCCGAGAA
CTCCAGAAGCCTCTGACGTCACTTTCCAGACCTGCATCGACCGTTTCTGTCAACAGAAGC
GCCTCTCTCCATGCCTCTTCGTCAGTGCCAAGTGGAGCAGGGTACAGCCGTCTGAGAAGT
AGATCGATGAAGGGCACCCCAGGAGTCATGACTCCCATCAGTCAGCTTACTGCAGCACTG
CCAACCATCCAGCAGAGCACTCCTTCCGTTCCCAACACAACTAATAGTAACACACCTACA
AGCACGGGTACTGCCAACTCCAACATCAACAACAATTACAACCCAACCACAAACCCAACC
ACAAACACGAACACAAACCCGACGACGACCACTACACAGAAACCCTACAATCTCAGAGAC
AACCAGCCCAGCAGAAGCAACAGCAGAGATAACGGAACTGCTTCTCTTCCTCAAAGTTTC
AGCACAAGTTATATGCCCAACACAATGCCCAGCGGAATGACTAGCACTAACTCTGCCACT
CCCCAGCAGTACTCGGCAGCCTCTACTACATGTCTCAACTCACCCCCTGTTACCCGAGGC
TTCACACCCATTCAGCAGCAGTCGCCGGCTCAGATCCAGGCGTTTGAGAGTATGATTGAC
TTTGATATCGACGACGAAGGCACCTCCACCTTTGCCGACTGCTCTCGAAGAGGAGGACTG
GTCATGTCCCCGACATCTGTCTTCTCTCCCACCGGCTCCAACGACGGCATGCTGACCTTG
GACGATCTGGGTAAGCAGGTGTCGGACTCGGACTCGGACTCGTACCACTCTTCGGAGTAC
GAGGAAGAGGAGTATGATATTGACATTGACCTTGCCCACAAGACGGAGAATTTGCATGTG
CTGGACAAGGACGAAGATAGGAACAACGAGCAGGAGGACACGAAGTAATCATTTGTATAT
ATGCATAACTAACGATGAATTTGTAGATAGAAGCAGACCAGCCGATGGGTGTGTGGCCTA
TTCCCACTTTTTGACAGAGGTATTGTACTGCTTGTATTCCTTAGAGTCACTACATGTATG
TACGAGCAAAGTGTACAATCATAAACAATCAATTAATGCAATAAATAAATCTATATCCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27874g_CDS-001

Protein length: 676 aa.
Product: Conserved hypothetical protein

>YALI0E27874g_CDS-001 MSTPVSESPYVHQRFDAALSAASALQELSAEDIQSSRLSHAHFVQTATGVRRIAKHLGKA
SVHIDVTKVMIITKARDNSLVYLTRDMARWLMDRGVVVYVDAKLEKSGRFDAPTLTANTP
ARMLRYWTAEMATQKPELFDLVITLGGDGTVLWASWLFQGTAPPVIPFALGSLGFLTNFE
YHDFGKHLTKAMTQGVHVHLRMRFTCTVFKREMNPETGKRDKHHSKIGRHEVLNEIVVDR
GPSPFISMLELYGDDNLLTIVQADGLILSTPTGSTAYSLSAGGSLVHPEIPAICVTPICP
HTLSFRPMLLPDSMTLKVVVPRKNSRTSAWVSFDGRSRVELKSGDYITVRASKFPFPTVI
RSDMDYIESVSRTLKWNTRELQKPLTSLSRPASTVSVNRSASLHASSSVPSGAGYSRLRS
RSMKGTPGVMTPISQLTAALPTIQQSTPSVPNTTNSNTPTSTGTANSNINNNYNPTTNPT
TNTNTNPTTTTTQKPYNLRDNQPSRSNSRDNGTASLPQSFSTSYMPNTMPSGMTSTNSAT
PQQYSAASTTCLNSPPVTRGFTPIQQQSPAQIQAFESMIDFDIDDEGTSTFADCSRRGGL
VMSPTSVFSPTGSNDGMLTLDDLGKQVSDSDSDSYHSSEYEEEEYDIDIDLAHKTENLHV
LDKDEDRNNEQEDTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG