YALI0E27808g

Overview

Description similar to uniprot|P38911 Saccharomyces cerevisiae YML074C (ohnolog of YLR449W) NPI46 proline cis-trans isomerase
Locus type CDS
Locus tag YALI0E27808g

Location

Species Yarrowia lipolytica Positions 3286105..3287429
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1325 (nuc.)
Previous locus YALI0E27797g Next locus YALI0E27830g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27808g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27808gYALI0E27808g_mRNA-001YALI0E27808g_CDS-001

Nucleotide sequence

 

>YALI0E27808g
ATGTCTAACAACGCCAACAACTGCCTTCCCCTGGCCTCCTACACCCTGGCCGTGTTCCCC
GGAATTCCCGTGGCCCCCATTGAGCAGGACTTCCCTGTTTCTGTGCGAATCACCATGGCT
GCCATTGATCCCGCCCGAATTGAGGGTGATGAGGAGGAGCCCGCCACTCTCCGAATCCTT
AAGCCTGCCGACAACTTCGACGATGAGGACGACGAGGATGACGAGGACGAGGATGACGAC
GATGAGGATGACGAAGTCTCTGCTGAGGACATGGCTCAGATCAAGAAGCTGATCGCCGCC
AACGAGGACGGTCTCGATGAGGTTGAGGGAGGAGACGACGATGAGGATGACGACGAGGAC
GACGAGATGGAGTTCGAGGAGGACGATGAGGACGACGACGACGAGGGTGAGATTGAGGAC
TTTGTTGTCTGCACTCTCTCCCCCAAGTTTGGATACCAGCAGACTCTTGATCTCGTTATC
ACCCCCGGTGAGCAGATCATGTTCGAGGTCACTGGCTCCTACGCCATCCACCTCTCCGGT
AACTACATTGAGCACCCCTACGACATGGAGGACGAGGATGAGCTCCTTGCTCTCGGTGAG
GACGACGAGGATGATGAGGACGAGCTCGACGAAGGCGAGTACGATCTCTCTCCCGATGAG
GATGAGGTCATCAACGGTGACGAGCGACTTGTCGAGCTCATGGAGCAGGACGACGAGGAC
GATGAGGACGATGAGGATGAGGAGGAAGAGCCCGTTGTCGAGCCTAAGAAGATCCTCAAG
CGAGCCGCCGAGGAGAAGAAGCAGGAGAAGGCCGCCAAGAAGGCCAAGGTTGCCTTCACC
AAGAACCTCGAGCAGGGCCCCACTCCCTCCGAGCCCAAGCCCAAGCTTGTCACCCGACAG
CTTGAGGGTGGTGTCAAGATTGAGGACCGAACCGTCGGTGAGGGTCCTTCCGCCAAGGTC
GGCTCCAAGGTCGGTGTCCGATACGTTGGCAAGCTCGCCAACGGTAAGGTCTTTGACTCC
AACTCCAAGGGTAAGCCTTTCTACTTCTCTGTCGGTAAGGGCGAGGTCATCCGAGGATGG
GACATTGGTGTCCAGGGTATGAAGGTCAAGGGTGAGCGACGAATCATTATCCCCCCTGGA
ATGGCCTACGGTAAGCAGAAGCTGCCCGGTATCCCCCCCAACTCCCAGCTTACTTTCGAT
GTTAAGGTCGTTAACATCAAATAAGCGATTATCTTCCAAGCCCACAAACGACTGGCCAAG
ACAAACATATTGGTTAAGTATGTATTTAATGTATTATTGATATAGACGTTAAGGTGTATG
CAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27808g_CDS-001

Protein length: 408 aa.
Product: Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase), putative

>YALI0E27808g_CDS-001 MSNNANNCLPLASYTLAVFPGIPVAPIEQDFPVSVRITMAAIDPARIEGDEEEPATLRIL
KPADNFDDEDDEDDEDEDDDDEDDEVSAEDMAQIKKLIAANEDGLDEVEGGDDDEDDDED
DEMEFEEDDEDDDDEGEIEDFVVCTLSPKFGYQQTLDLVITPGEQIMFEVTGSYAIHLSG
NYIEHPYDMEDEDELLALGEDDEDDEDELDEGEYDLSPDEDEVINGDERLVELMEQDDED
DEDDEDEEEEPVVEPKKILKRAAEEKKQEKAAKKAKVAFTKNLEQGPTPSEPKPKLVTRQ
LEGGVKIEDRTVGEGPSAKVGSKVGVRYVGKLANGKVFDSNSKGKPFYFSVGKGEVIRGW
DIGVQGMKVKGERRIIIPPGMAYGKQKLPGIPPNSQLTFDVKVVNIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG