YALI0E27797g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E27797g

Location

Species Yarrowia lipolytica Positions 3285037..3286065
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1029 (nuc.)
Previous locus YALI0E27786g Next locus YALI0E27808g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E27797g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E27797gYALI0E27797g_mRNA-001YALI0E27797g_CDS-001

Nucleotide sequence

 

>YALI0E27797g
ATGCTTAACCACGATATTTGGACTCAGATTTTCTCTTTGGTCGACTTTCGCACCGCGCTG
AACCTCAGATACTCGTGCAGAGAGCTCTTTCATCTGAGCAACGAACTGTCCGATGCAGTT
TGGGCTCTATACCTGAAAGATATCGGGGGAGAGTTCTGTGAGAAGGCCAAAAACAGCGTC
ATTCGACTCAACAGACCTCTGGTTTTCACCACAGGACCTTTGACCAAGTGCAGTCAGAAG
GCAGGTCCTCCTAGTCCGAAGGCTGGGTTCCTCAAACACCTCGTATACATACAAGGAGAC
GGTAAGATCGGGTATGTGGTGAACTATCGGGAATGGAGTGTTAAAGCGGTGGAAACTGAA
GGAGGAACTGATACTACGTCCTGGTACTGTTTCTCTGAATTCAACAAGGAGTTTGAGTCC
ATCGCCCTAGAAGAAAACAGCGTGGTGTGGCAGAAACGACAGGGACCAGATTTGAGAGTC
CAGATACCTATGAAATACCAAAACACAAGACACAAGCATCTCTTTAGAGCCTCGAATCCA
AACCAGACCTTTGTCTATCTCCATAGATACTGGGAAGACTCAGAGGAAACAGACAAACAA
GACTTTCTTAGTGACATACTGTTTGTGAACTGGAAGGAGAGGAGAATGAACTTGTTGGAA
GGATGTATAACTATGGCTTCCGCCAACAGTGTCAATTGCGTCCTTATAAATGGACTGCTA
TTCTTCAAGGGACCTAACTACACTCTTCAAGTGAAGAACATGCTTACTGGAGAACATCAT
CAGGTGAGTCCCAATGGGGTGGAAATCGGTTACCATGATGATAGATACGTGTGCTACAAC
ACTCTGGAAACAACACATGTGATAGATACACTCACTCTGTTAATCTACCCTCTGACTAAT
GTGCTATTCGACTTTCGCAGTGGAATTCAGCATATTGAAGGCCAGTTTATAAGCTGGTTG
CACCCTGTAGTTGGTTCAGGCACCTTAAATCTCAAACCAGGCCAAGTCATGAACCTCAGT
GACGTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E27797g_CDS-001

Protein length: 343 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E27797g_CDS-001 MLNHDIWTQIFSLVDFRTALNLRYSCRELFHLSNELSDAVWALYLKDIGGEFCEKAKNSV
IRLNRPLVFTTGPLTKCSQKAGPPSPKAGFLKHLVYIQGDGKIGYVVNYREWSVKAVETE
GGTDTTSWYCFSEFNKEFESIALEENSVVWQKRQGPDLRVQIPMKYQNTRHKHLFRASNP
NQTFVYLHRYWEDSEETDKQDFLSDILFVNWKERRMNLLEGCITMASANSVNCVLINGLL
FFKGPNYTLQVKNMLTGEHHQVSPNGVEIGYHDDRYVCYNTLETTHVIDTLTLLIYPLTN
VLFDFRSGIQHIEGQFISWLHPVVGSGTLNLKPGQVMNLSDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG